CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29749	Canola	cytosol	97.94	96.94
Bra036876.1-P	Field mustard	cytosol	96.7	95.13
AT4G14605.2	Thale cress	cytosol	87.63	86.21
KRH39012	Soybean	cytosol	58.35	63.31
KRH57654	Soybean	mitochondrion, plastid	61.86	62.5
KRG94311	Soybean	plastid	60.41	61.95
VIT_14s0171g00230.t01	Wine grape	plastid	62.27	61.01
PGSC0003DMT400052092	Potato	mitochondrion	60.0	60.12
Solyc02g093940.2.1	Tomato	nucleus	59.59	59.71
GSMUA_Achr3P02690_001	Banana	plastid	57.53	53.86
TraesCS6B01G244200.1	Wheat	plastid	49.07	49.17
TraesCS6A01G214200.1	Wheat	plastid	49.07	49.17
TraesCS6D01G196900.1	Wheat	plastid	49.07	49.07
HORVU6Hr1G054650.2	Barley	plastid	49.07	48.97
KXG30576	Sorghum	cytosol	49.07	48.37
Zm00001d017130_P001	Maize	plastid	48.04	47.94
CDY03022	Canola	extracellular	15.67	26.76
CDY45184	Canola	extracellular, mitochondrion	15.67	26.67
CDX99300	Canola	plastid	14.64	25.82
CDY29073	Canola	cytosol, plastid	17.53	25.37
CDX90610	Canola	cytosol	17.53	25.37
CDX92284	Canola	plastid	14.02	24.73
CDX84297	Canola	plastid	15.67	23.03
CDY18308	Canola	plastid	19.38	18.84
CDY14326	Canola	plastid	19.38	18.84
CDY36755	Canola	nucleus, vacuole	16.49	16.23
CDY66686	Canola	extracellular, vacuole	16.29	16.02
CDX79786	Canola	mitochondrion	15.67	15.42
CDY17890	Canola	mitochondrion	15.67	15.26
CDY66820	Canola	plastid	18.97	14.79
CDY13794	Canola	plastid	18.97	14.67
CDY22091	Canola	golgi, mitochondrion, plastid	14.85	13.56
CDY21931	Canola	golgi, mitochondrion, plastid	14.64	13.42

Protein Annotations

Gene3D:1.25.70.10	MapMan:15.6.2.2	GO:A0A078FTV4	UniProt:A0A078FTV4	EnsemblPlants:CDY16267	ProteinID:CDY16267
ProteinID:CDY16267.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003690	GO:GO:0005488
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
EnsemblPlantsGene:GSBRNA2T00090750001	InterPro:IPR038538	InterPro:MTERF	InterPro:MTERF_sf	PFAM:PF02536	PANTHER:PTHR13068
PANTHER:PTHR13068:SF9	SMART:SM00733	UniParc:UPI0004EE05F3	SEG:seg	:	:

Description

BnaC01g23020DBnaC01g23020D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FTV4]

Coordinates

chrLK032062:-:219603..221753

Molecular Weight (calculated)

55546.9 Da

IEP (calculated)

9.694

GRAVY (calculated)

-0.181

Length

485 amino acids

Sequence
(BLAST)

001: MQTFSQLGPS EVFFIARRDN PCTRAQLWFT GRLPFRQESF GFRIKNRVEY SARPVPPNLI AAEKEEAKAV LTLFFKKQGL SNSVSVRIIN KSDLFIDHLV
101: SRLHSVHKAR YLVGRELTTL EIRDSLIPYL EQLHEQHGDL LSDLVVSFPD PPPPAEDRPL SSSPPAALAP PHTKKLRAVS RVSELDTEGA LRPQTLYLLD
201: LGLNLEQIKT ITRKFAAFPY YSLEGKIKPV VEFLLDLGIP KSDIPTILCK RPQICGISLT DNLKPTMAFL ETLGIDKNQW AKIIYRFPAI LTYSRQKLIS
301: TVDFLTQTGL SEEQIGKILT RCPNIMSYSV EDKLRPTMEY FKSLNVDVAV LLHRCPQTFG LSIETNLKPV TEFFLQKGYG IDEIGIMISR YGALYTFSLR
401: ENLMPKWDYF QTMDYPKSEL VKFPQFFGYS LQERIKPRYE LVKRSRVTLL LNQVLSLSGV EFEKVVKKKM MKKLLSDHQS SSELL

Best Arabidopsis Sequence Match ( AT4G14605.2 )
(BLAST)

001: MQSLSQLGPS EIFLVARREK PSTRAQLWFT GRLSFRQETN GIRLKNRVEF SPRPVPPNLI AAEKEEAKAV LTLFFKKQGL SNSLSSRLIN KSDLFIDHLV
101: SRLHSVHKAR YLVGRELTTL EIRDSLIPYL EQLHEEHGDL LAELVVSFPD PPAEPRLVAS SPVSVLPPRG DTDSAADTRK LRAVSRVSEL DTEGALRPQT
201: LYLLDLGLNL EQIKTITRKF AAFPYYSLDG KIKPVVEFLL DLGIPKSDIP TILCKRPQIC GISLTDNLKP TMAFLETLGI DKNQWAKIIS RFPAILTYSR
301: QKLTSTVEFL SQTGLTEEQI GRILTRCPNI MSYSVEDKLR PTMEYFRSLN VDVAVLLHRC PQTFGLSIES NLKPVTEFFL EKGFGLDEIG IMISRYGALY
401: TFSLKENVMP KWDYFQTMDY PKSELVKFPQ FFGYSLQERI KPRYELVQRS GVRLLLNQVL SLSGIEFEKV VKKKMMKLVS NNVIAEQSSG GLL

Arabidopsis Description

MTERF5Transcription termination factor MTERF5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4JVI3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.