Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036876.1-P | Field mustard | cytosol | 88.44 | 88.44 |
| CDY16267 | Canola | cytosol | 86.21 | 87.63 |
| CDY29749 | Canola | cytosol | 86.61 | 87.14 |
| KRH39012 | Soybean | cytosol | 56.39 | 62.19 |
| KRH57654 | Soybean | mitochondrion, plastid | 60.04 | 61.67 |
| KRG94311 | Soybean | plastid | 58.42 | 60.89 |
| PGSC0003DMT400052092 | Potato | mitochondrion | 59.43 | 60.54 |
| VIT_14s0171g00230.t01 | Wine grape | plastid | 60.65 | 60.4 |
| Solyc02g093940.2.1 | Tomato | nucleus | 58.82 | 59.92 |
| GSMUA_Achr3P02690_001 | Banana | plastid | 55.78 | 53.09 |
| TraesCS6B01G244200.1 | Wheat | plastid | 48.88 | 49.79 |
| TraesCS6A01G214200.1 | Wheat | plastid | 48.88 | 49.79 |
| TraesCS6D01G196900.1 | Wheat | plastid | 48.88 | 49.69 |
| KXG30576 | Sorghum | cytosol | 49.29 | 49.39 |
| Zm00001d017130_P001 | Maize | plastid | 48.48 | 49.18 |
| HORVU6Hr1G054650.2 | Barley | plastid | 48.48 | 49.18 |
| AT2G34620.1 | Thale cress | plastid | 17.44 | 28.38 |
| AT3G18870.1 | Thale cress | plastid | 13.59 | 24.45 |
| AT2G03050.2 | Thale cress | cytosol, golgi, mitochondrion, plastid | 14.0 | 24.3 |
| AT4G38160.3 | Thale cress | cytosol, nucleus, peroxisome | 17.85 | 23.28 |
| AT2G36000.1 | Thale cress | plastid | 13.59 | 20.12 |
| AT5G54180.1 | Thale cress | plastid | 19.47 | 19.2 |
| AT2G44020.1 | Thale cress | mitochondrion | 17.24 | 16.77 |
| AT5G55580.1 | Thale cress | plastid | 15.82 | 15.73 |
| AT4G02990.1 | Thale cress | plastid | 17.04 | 15.53 |
| AT1G78930.1 | Thale cress | plastid | 18.46 | 15.4 |
| AT2G21710.1 | Thale cress | plastid | 18.66 | 14.35 |
Protein Annotations
| Gene3D:1.25.70.10 | MapMan:15.6.2.2 | EntrezGene:827109 | ProteinID:AEE83465.1 | EMBL:AK226653 | EMBL:AL161539 |
| ProteinID:ANM66035.1 | ArrayExpress:AT4G14605 | EnsemblPlantsGene:AT4G14605 | RefSeq:AT4G14605 | TAIR:AT4G14605 | RefSeq:AT4G14605-TAIR-G |
| EnsemblPlants:AT4G14605.2 | Unigene:At.33263 | UniProt:F4JVI3 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003690 | GO:GO:0003723 | GO:GO:0003727 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006353 | GO:GO:0006355 |
| GO:GO:0006950 | GO:GO:0006970 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008380 | GO:GO:0009058 |
| GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009628 | GO:GO:0009651 | GO:GO:0009658 | GO:GO:0009719 |
| GO:GO:0009737 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0019843 | GO:GO:0032502 | GO:GO:0042255 |
| InterPro:IPR038538 | InterPro:MTERF | InterPro:MTERF_sf | RefSeq:NP_001327961.1 | RefSeq:NP_567435.4 | PFAM:PF02536 |
| PANTHER:PTHR13068 | PANTHER:PTHR13068:SF9 | SMART:SM00733 | UniParc:UPI0001A7B0A4 | EMBL:Z97336 | SEG:seg |
Description
MTERF5Transcription termination factor MTERF5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4JVI3]
Coordinates
chr4:+:8378429..8380714
Molecular Weight (calculated)
55964.3 Da
IEP (calculated)
9.608
GRAVY (calculated)
-0.155
Length
493 amino acids
Sequence
(BLAST)
(BLAST)
001: MQSLSQLGPS EIFLVARREK PSTRAQLWFT GRLSFRQETN GIRLKNRVEF SPRPVPPNLI AAEKEEAKAV LTLFFKKQGL SNSLSSRLIN KSDLFIDHLV
101: SRLHSVHKAR YLVGRELTTL EIRDSLIPYL EQLHEEHGDL LAELVVSFPD PPAEPRLVAS SPVSVLPPRG DTDSAADTRK LRAVSRVSEL DTEGALRPQT
201: LYLLDLGLNL EQIKTITRKF AAFPYYSLDG KIKPVVEFLL DLGIPKSDIP TILCKRPQIC GISLTDNLKP TMAFLETLGI DKNQWAKIIS RFPAILTYSR
301: QKLTSTVEFL SQTGLTEEQI GRILTRCPNI MSYSVEDKLR PTMEYFRSLN VDVAVLLHRC PQTFGLSIES NLKPVTEFFL EKGFGLDEIG IMISRYGALY
401: TFSLKENVMP KWDYFQTMDY PKSELVKFPQ FFGYSLQERI KPRYELVQRS GVRLLLNQVL SLSGIEFEKV VKKKMMKLVS NNVIAEQSSG GLL
101: SRLHSVHKAR YLVGRELTTL EIRDSLIPYL EQLHEEHGDL LAELVVSFPD PPAEPRLVAS SPVSVLPPRG DTDSAADTRK LRAVSRVSEL DTEGALRPQT
201: LYLLDLGLNL EQIKTITRKF AAFPYYSLDG KIKPVVEFLL DLGIPKSDIP TILCKRPQIC GISLTDNLKP TMAFLETLGI DKNQWAKIIS RFPAILTYSR
301: QKLTSTVEFL SQTGLTEEQI GRILTRCPNI MSYSVEDKLR PTMEYFRSLN VDVAVLLHRC PQTFGLSIES NLKPVTEFFL EKGFGLDEIG IMISRYGALY
401: TFSLKENVMP KWDYFQTMDY PKSELVKFPQ FFGYSLQERI KPRYELVQRS GVRLLLNQVL SLSGIEFEKV VKKKMMKLVS NNVIAEQSSG GLL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.