Factsheet for AT5G54180.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 3
golgi 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18308	Canola	plastid	87.2	87.37
CDY14326	Canola	plastid	87.2	87.37
Bra003005.1-P	Field mustard	plastid	86.8	86.97
PGSC0003DMT400001588	Potato	plastid	52.4	50.58
Solyc03g081300.2.1	Tomato	plastid	48.8	49.59
KRH64303	Soybean	nucleus	46.6	46.79
AT3G18870.1	Thale cress	plastid	12.8	23.36
AT2G03050.2	Thale cress	cytosol, golgi, mitochondrion, plastid	13.0	22.89
AT2G34620.1	Thale cress	plastid	12.8	21.12
AT2G36000.1	Thale cress	plastid	13.6	20.42
AT4G14605.2	Thale cress	cytosol	19.2	19.47
AT4G38160.3	Thale cress	cytosol, nucleus, peroxisome	14.0	18.52
AT2G44020.1	Thale cress	mitochondrion	14.8	14.6
AT1G78930.1	Thale cress	plastid	17.0	14.38
AT5G55580.1	Thale cress	plastid	13.8	13.91
AT4G02990.1	Thale cress	plastid	14.8	13.68
VIT_16s0098g00970.t01	Wine grape	plastid	55.2	13.68
AT2G21710.1	Thale cress	plastid	16.0	12.48

Protein Annotations

Gene3D:1.25.70.10	MapMan:15.6.1.2.3.5	MapMan:15.6.2.2	EntrezGene:835506	UniProt:A0A178U8Y7	ProteinID:AED96463.1
ArrayExpress:AT5G54180	EnsemblPlantsGene:AT5G54180	RefSeq:AT5G54180	TAIR:AT5G54180	RefSeq:AT5G54180-TAIR-G	EnsemblPlants:AT5G54180.1
TAIR:AT5G54180.1	EMBL:AY081343	EMBL:AY088205	Unigene:At.29509	ProteinID:BAB11580.1	EMBL:BT000254
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003690	GO:GO:0003723	GO:GO:0003727
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139
GO:GO:0006351	GO:GO:0006353	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0008380
GO:GO:0009058	GO:GO:0009295	GO:GO:0009507	GO:GO:0009508	GO:GO:0009536	GO:GO:0009658
GO:GO:0009987	GO:GO:0016043	GO:GO:0019843	GO:GO:0032502	GO:GO:0042255	InterPro:IPR038538
InterPro:MTERF	InterPro:MTERF_sf	RefSeq:NP_200229.1	ProteinID:OAO90313.1	PFAM:PF02536	PO:PO:0000013
PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081
PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103
PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005
PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030
PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030
PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	Symbol:PTAC15	PANTHER:PTHR13068
PANTHER:PTHR13068:SF32	UniProt:Q9FK23	SMART:SM00733	UniParc:UPI00000AC277	SEG:seg	:

Description

MTERF8PTAC15 [Source:UniProtKB/TrEMBL;Acc:A0A178U8Y7]

Coordinates

chr5:+:21988457..21990393

Molecular Weight (calculated)

56352.9 Da

IEP (calculated)

7.544

GRAVY (calculated)

0.073

Length

500 amino acids

Sequence
(BLAST)

001: MVILSLVSCS FSVFSPPISL RLHLPPVTSL CSHGTFPASS TFRSQLQPLL ISCLNHREPA LTFRCSCLSS PIESGSQIES LFSLFRDIGF IEEETEMILA
101: KNPDIKSTSL DKIGARVASL QSLKINGFPL QGLIAKCPNL LTSEEFDLVI SFLVDELEGR LDPELVERLL SVVDTSILLS FNQKVRLLLL HGIPKEKISH
201: VLNKVYLNKL LYQKSVEDIE RLISFLEPFG GIGIIARRPV ILNSDLDSQL IPRVDFIRNL SGEDDFATGT VLRRLPAILS YSVEHMNGQV EFLKSFAGLT
301: SEQVFKIVHV FPNVISTSKE RKLRPRIEFL KECGFDSPGM FKFLSKAPLI LALSENNLSH KLGFLVKIGY KHRTKELAFA MGAVTRTSSD NMQRVIGLYL
401: SYGLSFEDIL AMSTKHPQVL QYNYTSLEEK LEYLIEYMGR EVEELLAFPA FLGYKLDSRI KHRYEEKLKS RGENMSLNKL LTVSAERFSK AADNIEMICL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.