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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 8
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 2
  • plasma membrane 1
  • golgi 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY14326 Canola plastid 99.6 99.6
AT5G54180.1 Thale cress plastid 86.97 86.8
PGSC0003DMT400001588 Potato plastid 51.7 49.81
Solyc03g081300.2.1 Tomato plastid 47.9 48.58
KRH64303 Soybean nucleus 46.69 46.79
Bra024793.1-P Field mustard extracellular 13.83 24.3
Bra022367.1-P Field mustard plastid 12.42 22.55
Bra012812.1-P Field mustard cytosol 14.03 20.9
Bra017269.1-P Field mustard plastid 13.43 20.24
Bra036876.1-P Field mustard cytosol 18.84 19.07
Bra004800.1-P Field mustard cytosol 14.43 16.11
Bra028970.1-P Field mustard plastid 14.63 14.84
VIT_16s0098g00970.t01 Wine grape plastid 54.11 13.38
Bra036228.1-P Field mustard golgi, mitochondrion, plastid 13.83 12.99
Bra031213.1-P Field mustard plastid 15.83 12.6
Protein Annotations
Gene3D:1.25.70.10MapMan:15.6.1.2.3.5MapMan:15.6.2.2EnsemblPlantsGene:Bra003005EnsemblPlants:Bra003005.1EnsemblPlants:Bra003005.1-P
GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003690GO:GO:0005488GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006139GO:GO:0006355GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009295GO:GO:0009507GO:GO:0009508GO:GO:0009536
GO:GO:0009987InterPro:IPR038538UniProt:M4CFM3InterPro:MTERFInterPro:MTERF_sfPFAM:PF02536
PANTHER:PTHR13068PANTHER:PTHR13068:SF32SMART:SM00733UniParc:UPI0002543EB0SEG:seg:
Description
AT5G54180 (E=3e-237) PTAC15 | PTAC15 (PLASTID TRANSCRIPTIONALLY ACTIVE15)
Coordinates
chrA10:+:6119582..6121179
Molecular Weight (calculated)
56500.0 Da
IEP (calculated)
7.815
GRAVY (calculated)
0.035
Length
499 amino acids
Sequence
(BLAST)
001: MVILSLVSCS VSLFSPPISL RLRFPPVTSL FSHVSFPAST FKPELRPLFV CCLQRRETAH IHRCNCLTCT IDGETQIGSL FSLFRDIGFK EEETEMILAK
101: NPDVKSTPLD KISARVASLQ SLKLDGFALQ GLIAKCPSLL TSEELDLVIT FLVDELEGRL DPELVERILA ASDTSFLLSF NQKVRLLIHH GIPKEKISYV
201: LSKVYLNKLM YQKSVEDIER LISYLEPFGG IGIIARRPVI LNSDLDTQLI PRVEFIRNLS GEDDFATGTV LRRLPAILSY SVDHMTSHVE FLKSFAGLTS
301: EQVFKIVHVF PNVISTSKER KLRPRIEFLK ESGFDSPGMF KFLSKAPLFL ALSEDNLSHK LGFLVKIGYK HRTRELAFAM GAVTRTSSDN MQRVIGLYLS
401: YGLSLEDILA MSTKHPQVLQ YSHTSLEEKL EYLIEYMGRE VEELLAFPAF LGYKLDSRIK HRYEEKLKSR GENMSLNKLL TVSAERFSKT ADNIEVICL
Best Arabidopsis Sequence Match ( AT5G54180.1 )
(BLAST)
001: MVILSLVSCS FSVFSPPISL RLHLPPVTSL CSHGTFPASS TFRSQLQPLL ISCLNHREPA LTFRCSCLSS PIESGSQIES LFSLFRDIGF IEEETEMILA
101: KNPDIKSTSL DKIGARVASL QSLKINGFPL QGLIAKCPNL LTSEEFDLVI SFLVDELEGR LDPELVERLL SVVDTSILLS FNQKVRLLLL HGIPKEKISH
201: VLNKVYLNKL LYQKSVEDIE RLISFLEPFG GIGIIARRPV ILNSDLDSQL IPRVDFIRNL SGEDDFATGT VLRRLPAILS YSVEHMNGQV EFLKSFAGLT
301: SEQVFKIVHV FPNVISTSKE RKLRPRIEFL KECGFDSPGM FKFLSKAPLI LALSENNLSH KLGFLVKIGY KHRTKELAFA MGAVTRTSSD NMQRVIGLYL
401: SYGLSFEDIL AMSTKHPQVL QYNYTSLEEK LEYLIEYMGR EVEELLAFPA FLGYKLDSRI KHRYEEKLKS RGENMSLNKL LTVSAERFSK AADNIEMICL
Arabidopsis Description
MTERF8PTAC15 [Source:UniProtKB/TrEMBL;Acc:A0A178U8Y7]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.