Factsheet for Bra004800.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX79786	Canola	mitochondrion	99.78	90.47
AT2G44020.1	Thale cress	mitochondrion	90.16	79.49
KRH60420	Soybean	cytosol	67.56	74.02
VIT_11s0016g02240.t01	Wine grape	mitochondrion	77.63	72.14
KRH41721	Soybean	mitochondrion	77.63	69.54
PGSC0003DMT400023814	Potato	mitochondrion	74.5	67.68
Solyc11g017050.1.1	Tomato	extracellular	74.72	67.07
Os02t0783100-01	Rice	mitochondrion	66.67	61.44
EES07645	Sorghum	mitochondrion	67.11	61.35
Zm00001d052081_P003	Maize	mitochondrion	66.44	60.74
TraesCS6D01G325000.1	Wheat	mitochondrion	65.1	59.27
TraesCS6B01G376100.1	Wheat	mitochondrion	64.65	58.86
GSMUA_Achr10P...	Banana	mitochondrion	45.86	55.26
HORVU6Hr1G082970.1	Barley	cytosol	64.88	55.03
TraesCS6A01G343900.1	Wheat	plastid	65.32	54.07
Bra036228.1-P	Field mustard	golgi, mitochondrion, plastid	47.65	40.11
Bra024793.1-P	Field mustard	extracellular	14.77	23.24
Bra012812.1-P	Field mustard	cytosol	17.23	22.99
Bra022367.1-P	Field mustard	plastid	13.65	22.18
Bra017269.1-P	Field mustard	plastid	14.99	20.24
Bra028970.1-P	Field mustard	plastid	16.55	15.04
Bra036876.1-P	Field mustard	cytosol	16.55	15.01
Bra031213.1-P	Field mustard	plastid	20.58	14.67
Bra003005.1-P	Field mustard	plastid	16.11	14.43

Protein Annotations

Gene3D:1.25.70.10	MapMan:15.6.2.2	MapMan:16.12.2.2.1.5	EnsemblPlantsGene:Bra004800	EnsemblPlants:Bra004800.1	EnsemblPlants:Bra004800.1-P
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003690	GO:GO:0005488	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR038538
UniProt:M4CKR5	InterPro:MTERF	InterPro:MTERF_sf	PFAM:PF02536	PANTHER:PTHR13068	PANTHER:PTHR13068:SF8
SMART:SM00733	UniParc:UPI0002547C4C	SEG:seg	:	:	:

Description

AT2G44020 (E=8e-227) | mitochondrial transcription termination factor-related / mTERF-related

Coordinates

chrA05:-:1874741..1876084

Molecular Weight (calculated)

50785.7 Da

IEP (calculated)

6.780

GRAVY (calculated)

-0.038

Length

447 amino acids

Sequence
(BLAST)

001: MPTVTWGVIQ GKKEKLVNRV KVCDHLKTLG VITDELETIE LPSTLEVISE RLEFLHKLGL TIDDVNEYPL MLGCSVRKNL IPVLAYLEKI GISRSKLGEF
101: VKNYPQVLHA SVVVELAPVV KFLRGLDVEK QDLGYVLMKY PELLGFKLEG TMSTSVAYLV SIGVSPRDIG PMVTQYPYLL GMRVGTMIKP LVDYLISIGL
201: PKKIVARMLE KRAYVIGYSL EETVKPNVEC LISFGVRREM LPLVIAQYPQ ILGLPVKAKM STQQYFFSLK LKVDPEGFAR VVEKMPQVVS LKQNVIMKPV
301: EFLLGRGFRV EDVARMVVRC PQILCSRVEL MKNGYYFYKT EMGRPMKELV EYPEYFTYGL ESRIKPRYQK LQGKGIRSSL NWFLNCSDQR FEERLEGNFI
401: DVDSEGPVFE MGGKLDMPGG VGGEVVSDED DDESDDDEVL YRRTLTL

Best Arabidopsis Sequence Match ( AT2G44020.1 )
(BLAST)

001: MSYLLRRNKF VALLKRQSLI FPITSTEAKT LINPDPNIPQ FQNPCSIFRI AHYATQSSKF PEYEMPTVTW GVIQGKKEKL VNRVKICDYL KGLGIITDEL
101: ESIELPSTIE VMCERVEFLQ KLGLTIDDIN EYPLMLGCSV RKNLIPVLAY LEKIGISRSK LGEFVKNYPQ VLHASVVVEL APVVKFLRGL DVEKQDLGYV
201: LMKYPELLGF KLEGTMSTSV AYLVSIGVSP RDIGPMVTQY PYLLGMRVGT MIKPLVDYLI SIGLPKKIVA RMLEKRSYIV GYNLEETVKP NVDCLISFGV
301: KKELLPLLIA QYPQILGLPV KAKMSTQQYF FSLKLKIDPE GFARVVEKMP QIVSLKQNVI MKPIEFLLGR AFQVEDIAKM VVRCPQILCS RVELMKNSYY
401: FYKTEMGRPM KELVEYPEYF TYSLESRIKP RYQKLQSKGI RSSLNWFLNC SDQRFEERLQ GNFIDPDTEG PTFDMGGKLE MPGGEIVTDE EEDESDDEVL
501: YRRTLTL

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:O80572]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.