Factsheet for GSMUA_Achr10P03010_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
extracellular 1
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH60420	Soybean	cytosol	57.95	52.7
VIT_11s0016g02240.t01	Wine grape	mitochondrion	66.04	50.94
KRH41721	Soybean	mitochondrion	66.31	49.3
PGSC0003DMT400023814	Potato	mitochondrion	64.69	48.78
Os02t0783100-01	Rice	mitochondrion	63.61	48.66
Solyc11g017050.1.1	Tomato	extracellular	64.96	48.39
TraesCS6D01G325000.1	Wheat	mitochondrion	62.8	47.45
TraesCS6B01G376100.1	Wheat	mitochondrion	62.26	47.05
EES07645	Sorghum	mitochondrion	61.99	47.03
Zm00001d052081_P003	Maize	mitochondrion	61.19	46.42
Bra004800.1-P	Field mustard	cytosol	55.26	45.86
AT2G44020.1	Thale cress	mitochondrion	61.19	44.77
CDX79786	Canola	mitochondrion	59.03	44.42
HORVU6Hr1G082970.1	Barley	cytosol	62.53	44.02
CDY17890	Canola	mitochondrion	59.03	43.98
TraesCS6A01G343900.1	Wheat	plastid	62.8	43.15
GSMUA_Achr3P24870_001	Banana	cytosol, mitochondrion, plastid	22.37	21.28
GSMUA_Achr6P31220_001	Banana	plastid	12.13	20.0
GSMUA_Achr2P08550_001	Banana	plastid	13.21	17.88
GSMUA_Achr5P23270_001	Banana	mitochondrion	14.02	16.83
GSMUA_AchrUn_...	Banana	plastid	13.75	15.13
GSMUA_Achr6P02570_001	Banana	plastid	8.36	12.86
GSMUA_AchrUn_...	Banana	cytosol	10.51	11.78
GSMUA_Achr3P02690_001	Banana	plastid	14.82	10.62
GSMUA_Achr3P29890_001	Banana	plastid	14.29	10.45
GSMUA_Achr3P27780_001	Banana	plastid	16.17	9.84
GSMUA_Achr4P23060_001	Banana	mitochondrion	16.44	8.74
GSMUA_Achr7P20690_001	Banana	cytosol	5.12	8.6

Protein Annotations

Gene3D:1.25.70.10	MapMan:15.6.2.2	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003690
GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr10G03010_001	EnsemblPlants:GSMUA_Achr10P03010_001	EnsemblPlants:GSMUA_Achr10T03010_001	InterPro:IPR038538	UniProt:M0REX8
InterPro:MTERF	InterPro:MTERF_sf	PFAM:PF02536	PANTHER:PTHR13068	PANTHER:PTHR13068:SF8	SMART:SM00733
UniParc:UPI000295EDBD	SEG:seg	:	:	:	:

Description

mitochondrial transcription termination factor family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G03010_001]

Coordinates

chr10:-:10105609..10111907

Molecular Weight (calculated)

42055.1 Da

IEP (calculated)

8.531

GRAVY (calculated)

-0.247

Length

371 amino acids

Sequence
(BLAST)

001: MNFVVRRKPP LFSISRPLPL LPNPACHASA AGEASASRRS RYSTAVPGEK GSPSSSLSSS SKFPEYELPS VTWGVIQGRK ERLVSRVIIS DYLKSLGIAP
101: DELADLELPS SVDVMSERVD FLTRLGLSVD DLNAYPLLLA CSVRKNMIPV LGYLEKLGVP RPRLGEFSLP SVIAQFPQIL GLPLKAKLST QQYFFNLKLK
201: IDPDGFTRAM EKMPQIVSLH QSVMLKPIEF LRGRGIPDED VANMVVKCPQ LLACRVELMK NSYYFFKSEM KQPVQELFEF PEYFTYSLES RIKPRYQRLV
301: NKGIRCKLDW FLNCSDQRFE ERLRGDYIEA DAPGPSFVMG GKLEMPRSHL VSDKEEDESD EEVLYRRTIS L

Best Arabidopsis Sequence Match ( AT2G44020.1 )
(BLAST)

001: MSYLLRRNKF VALLKRQSLI FPITSTEAKT LINPDPNIPQ FQNPCSIFRI AHYATQSSKF PEYEMPTVTW GVIQGKKEKL VNRVKICDYL KGLGIITDEL
101: ESIELPSTIE VMCERVEFLQ KLGLTIDDIN EYPLMLGCSV RKNLIPVLAY LEKIGISRSK LGEFVKNYPQ VLHASVVVEL APVVKFLRGL DVEKQDLGYV
201: LMKYPELLGF KLEGTMSTSV AYLVSIGVSP RDIGPMVTQY PYLLGMRVGT MIKPLVDYLI SIGLPKKIVA RMLEKRSYIV GYNLEETVKP NVDCLISFGV
301: KKELLPLLIA QYPQILGLPV KAKMSTQQYF FSLKLKIDPE GFARVVEKMP QIVSLKQNVI MKPIEFLLGR AFQVEDIAKM VVRCPQILCS RVELMKNSYY
401: FYKTEMGRPM KELVEYPEYF TYSLESRIKP RYQKLQSKGI RSSLNWFLNC SDQRFEERLQ GNFIDPDTEG PTFDMGGKLE MPGGEIVTDE EEDESDDEVL
501: YRRTLTL

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:O80572]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.