Factsheet for GSMUA_Achr2P08550_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH40190	Soybean	cytosol	24.82	61.82
VIT_03s0063g02460.t01	Wine grape	plastid	56.57	56.16
AT3G18870.1	Thale cress	plastid	51.46	51.46
CDX92284	Canola	plastid	51.09	50.91
CDX99300	Canola	plastid	51.09	50.91
Bra022367.1-P	Field mustard	plastid	50.73	50.55
PGSC0003DMT400001905	Potato	plastid	51.46	50.18
KRH01028	Soybean	plastid	49.63	49.63
Solyc01g109550.2.1	Tomato	mitochondrion	52.19	48.64
GSMUA_Achr6P02570_001	Banana	plastid	26.64	30.29
GSMUA_Achr5P23270_001	Banana	mitochondrion	31.39	27.83
GSMUA_Achr6P31220_001	Banana	plastid	22.26	27.11
GSMUA_AchrUn_...	Banana	plastid	32.85	26.71
GSMUA_AchrUn_...	Banana	cytosol	21.9	18.13
GSMUA_Achr3P29890_001	Banana	plastid	25.18	13.61
GSMUA_Achr10P...	Banana	mitochondrion	17.88	13.21
GSMUA_Achr3P02690_001	Banana	plastid	24.45	12.93
GSMUA_Achr7P20690_001	Banana	cytosol	10.22	12.67
GSMUA_Achr3P27780_001	Banana	plastid	21.9	9.84
GSMUA_Achr3P24870_001	Banana	cytosol, mitochondrion, plastid	13.14	9.23
GSMUA_Achr4P23060_001	Banana	mitochondrion	22.63	8.88

Protein Annotations

Gene3D:1.25.70.10	MapMan:15.6.2.2	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003690
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139
GO:GO:0006355	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507
GO:GO:0009536	GO:GO:0009628	GO:GO:0009987	GO:GO:0042646	GO:GO:0071472	EnsemblPlantsGene:GSMUA_Achr2G08550_001
EnsemblPlants:GSMUA_Achr2P08550_001	EnsemblPlants:GSMUA_Achr2T08550_001	InterPro:IPR038538	UniProt:M0S696	InterPro:MTERF	InterPro:MTERF_sf
PFAM:PF02536	PANTHER:PTHR13068	PANTHER:PTHR13068:SF19	SMART:SM00733	UniParc:UPI000296BE32	SEG:seg

Description

Putative mTERF domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr2G08550_001]

Coordinates

chr2:-:12514116..12515107

Molecular Weight (calculated)

31319.4 Da

IEP (calculated)

11.083

GRAVY (calculated)

-0.196

Length

274 amino acids

Sequence
(BLAST)

001: MPIALCSIRL PILSSSQIPH RNHKPSSVSS PAPPLVLRFR TSRRQNLRYL KSLGITATSP ESIAWTLAVV EFLKSKGFSD RHFPRLSSAS PTIFSSADVN
101: RTLAPVFAFL VAELSADPDQ ARDLILRCPD LLMASVDYRL RPTLLFLQEL GLRSLSSPTN LNAHLLNTPV EKLASKIRFL EGLGLSHQEA SKVCARCPAI
201: FGYSVENNLR PKVEYLVREM GRSMEEVNKF PQYFAFSMEK RIRPRHLHLK QRGVRIPLQR MLLWSDHRFY RKWK

Best Arabidopsis Sequence Match ( AT3G18870.1 )
(BLAST)

001: MAVIASLHHL QPLSSFSSPP SPSSSKPLYL KFQTSHRENL RHLSSLGIVP QNPRLAPPAN DLSVILSAVN LLKSKGISDE DFPRLVFLCP QLFSPTFDIS
101: KLDPVFDFLT GELGASAEES RGLIVNCPNI LFSDVEYCLR PTLVYLKELG VRNLNRASKT NAHVLNTRVE KLRAKMRFLK SIGFEHEEAA RVCGRIPAIF
201: GYSVEDNLRP KFEFLVYDME RELEELKKFP QYFAFSLGKR IRPRHWHLKK KNVRVSLSRM LMWGDQKFYS KWKP

Arabidopsis Description

At3g18870 [Source:UniProtKB/TrEMBL;Acc:Q9LHN2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.