Factsheet for GSMUA_Achr7P20690_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
peroxisome 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	79.19	52.87
KRH32500	Soybean	cytosol	60.63	40.0
KRH19886	Soybean	cytosol	60.63	40.0
Solyc11g044360.1.1	Tomato	cytosol	57.01	39.75
PGSC0003DMT400059549	Potato	cytosol	58.37	39.33
VIT_03s0038g04180.t01	Wine grape	cytosol, plastid	59.28	37.01
Os08t0515800-01	Rice	cytosol	55.66	36.94
EES14251	Sorghum	cytosol	54.3	35.93
TraesCS7A01G250000.3	Wheat	cytosol	53.85	35.74
TraesCS7B01G141200.1	Wheat	cytosol	53.39	35.44
CDY29073	Canola	cytosol, plastid	53.39	35.22
Zm00001d049743_P001	Maize	cytosol, mitochondrion, nucleus	52.94	35.03
Bra012812.1-P	Field mustard	cytosol	52.49	34.63
CDX90610	Canola	cytosol	52.49	34.63
TraesCS7D01G248600.1	Wheat	cytosol	46.61	33.12
AT4G38160.3	Thale cress	cytosol, nucleus, peroxisome	56.11	32.8
HORVU7Hr1G051550.3	Barley	mitochondrion	52.49	29.97
GSMUA_Achr6P31220_001	Banana	plastid	10.41	10.22
GSMUA_Achr2P08550_001	Banana	plastid	12.67	10.22
GSMUA_Achr5P23270_001	Banana	mitochondrion	13.12	9.39
GSMUA_Achr3P29890_001	Banana	plastid	19.46	8.48
GSMUA_Achr3P02690_001	Banana	plastid	19.46	8.3
GSMUA_AchrUn_...	Banana	plastid	11.76	7.72
GSMUA_Achr4P23060_001	Banana	mitochondrion	23.98	7.59
GSMUA_Achr3P27780_001	Banana	plastid	19.91	7.21
GSMUA_Achr3P24870_001	Banana	cytosol, mitochondrion, plastid	12.67	7.18
GSMUA_Achr6P02570_001	Banana	plastid	5.88	5.39
GSMUA_Achr10P...	Banana	mitochondrion	8.6	5.12

Protein Annotations

Gene3D:1.25.70.10	MapMan:15.6.2.2	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003690
GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr7G20690_001	EnsemblPlants:GSMUA_Achr7P20690_001	EnsemblPlants:GSMUA_Achr7T20690_001	InterPro:IPR038538	UniProt:M0TJA6
InterPro:MTERF	InterPro:MTERF_sf	PFAM:PF02536	PANTHER:PTHR13068	PANTHER:PTHR13068:SF5	SMART:SM00733
UniParc:UPI0002966943	:	:	:	:	:

Description

Putative mTERF domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr7G20690_001]

Coordinates

chr7:-:23740473..23741471

Molecular Weight (calculated)

25113.1 Da

IEP (calculated)

10.066

GRAVY (calculated)

-0.137

Length

221 amino acids

Sequence
(BLAST)

001: MERMTDQKHS IVEFFKEKGF DDESINRLMR RCNRLESTGR GRATESWDYL GSIGIQKRRL LYVVSKCPKI LTMGLNQKLV TTVRCLATLG SKPGEVTSAI
101: TKFPHIVSCS VEEKLCPLLA FFHMLGISDK QLGKMLLLNP RLISCSVETK LTQITDFLAS IGLNKEGLIV YPEFFRHGEK KSLEFRHKLL KQKNVHCSLS
201: EMLSCNRKMF IAKYGLAAGF S

Best Arabidopsis Sequence Match ( AT4G38160.4 )
(BLAST)

001: MEVTNTSSIM WFFRDKGFDD PSIDKMLRKC KQLEKAQSDV ASENWDYLSN IVGIQERKLP YIVSRCPKIL TLRLDERLIP MVECLSSLGR NPREVASAIT
101: KFPPILSHSV EEKLCPLLAF FQALGVPETQ LGKMILFNPR LISYSIDTKL TVIVSFLASL GLDQDGMIGK VLVKNPFLMG YSVDKRLRPT TEFLKSSVGL
201: SEDGIKSVVM NFPQLLCRDV NKILKPNYDY LKECGFGDSQ IATMVTGYPQ ILIKSVKNSL QPRIRFLVQV MGRGMDEVAS YPEFFHHGLK KKVESRFKLV
301: KKNNIDCSLR EMLDCNTKKF HEKFGFSEVT ASF

Arabidopsis Description

pde191Mitochondrial transcription termination factor family protein [Source:UniProtKB/TrEMBL;Acc:F4JSY9]
SUBAcon: [cytosol,nucleus,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.