CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d049743_P001	Maize	cytosol, mitochondrion, nucleus	92.81	92.81
Os08t0515800-01	Rice	cytosol	88.62	88.89
TraesCS7A01G250000.3	Wheat	cytosol	82.63	82.88
TraesCS7B01G141200.1	Wheat	cytosol	82.34	82.58
TraesCS7D01G248600.1	Wheat	cytosol	76.35	81.99
HORVU7Hr1G051550.3	Barley	mitochondrion	81.14	70.03
GSMUA_AchrUn_...	Banana	cytosol	59.88	60.42
Solyc11g044360.1.1	Tomato	cytosol	55.69	58.68
KRH19886	Soybean	cytosol	58.38	58.21
PGSC0003DMT400059549	Potato	cytosol	56.29	57.32
KRH32500	Soybean	cytosol	56.89	56.72
VIT_03s0038g04180.t01	Wine grape	cytosol, plastid	58.38	55.08
GSMUA_Achr7P20690_001	Banana	cytosol	35.93	54.3
Bra012812.1-P	Field mustard	cytosol	51.8	51.64
CDX90610	Canola	cytosol	51.8	51.64
CDY29073	Canola	cytosol, plastid	51.5	51.34
AT4G38160.3	Thale cress	cytosol, nucleus, peroxisome	54.19	47.88
KXG30576	Sorghum	cytosol	27.54	18.7
OQU77962	Sorghum	plastid	24.85	16.67
OQU90879	Sorghum	plastid	15.87	16.61
KXG39318	Sorghum	plastid	15.27	16.29
EES07645	Sorghum	mitochondrion	23.05	15.75
OQU85198	Sorghum	mitochondrion, plastid	12.28	14.7
OQU89932	Sorghum	plastid	25.45	13.96
OQU88410	Sorghum	plastid	22.46	12.46
EER97446	Sorghum	mitochondrion	18.26	12.06

Protein Annotations

Gene3D:1.25.70.10	MapMan:15.6.2.2	EntrezGene:8064010	UniProt:C5YIN1	EnsemblPlants:EES14251	ProteinID:EES14251
ProteinID:EES14251.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003690	GO:GO:0003723
GO:GO:0003727	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0008380	GO:GO:0009058
GO:GO:0009507	GO:GO:0009536	GO:GO:0009579	GO:GO:0009658	GO:GO:0009987	GO:GO:0016020
GO:GO:0016043	GO:GO:0019843	GO:GO:0032502	GO:GO:0042255	GO:GO:0042651	InterPro:IPR038538
InterPro:MTERF	InterPro:MTERF_sf	PFAM:PF02536	PANTHER:PTHR13068	PANTHER:PTHR13068:SF5	SMART:SM00733
EnsemblPlantsGene:SORBI_3007G206100	unigene:Sbi.6027	UniParc:UPI0001A87E35	RefSeq:XP_002444756.1	:	:

Description

hypothetical protein

Coordinates

chr7:+:63611125..63612654

Molecular Weight (calculated)

37414.2 Da

IEP (calculated)

9.860

GRAVY (calculated)

-0.054

Length

334 amino acids

Sequence
(BLAST)

001: MASGVNDGSG KSLTHWLREN GFDDDAVARM SRRCRNLHSL DAGEASGVWD YLLTGVKMER RKLRHVVAKC PKVLTLSVDG KLVPTVQCLA TLQARPGEVA
101: QAIAKFPQIL FHSVEEKLCP LLAFFQTLGV SEKQLAKLLM VNPRLISYSI EAKFSQTVDF LVGLGIDKEG MIGKILTKEP YIMGYSVDKR LRPTAEFLKS
201: AVGLQGQDLK RVIMSFPDIL SRDVDKILRP NLAFLQSCGF SRNQVTALVA GYPPVLIKSI KHCLEPRMKF LVEEMGRDMG EVVDYPQFFR HGLKRSLEYR
301: HKVLKQMNSS CSLSEMLDCN QKKFAMKFGL VAAV

Best Arabidopsis Sequence Match ( AT4G38160.4 )
(BLAST)

001: MEVTNTSSIM WFFRDKGFDD PSIDKMLRKC KQLEKAQSDV ASENWDYLSN IVGIQERKLP YIVSRCPKIL TLRLDERLIP MVECLSSLGR NPREVASAIT
101: KFPPILSHSV EEKLCPLLAF FQALGVPETQ LGKMILFNPR LISYSIDTKL TVIVSFLASL GLDQDGMIGK VLVKNPFLMG YSVDKRLRPT TEFLKSSVGL
201: SEDGIKSVVM NFPQLLCRDV NKILKPNYDY LKECGFGDSQ IATMVTGYPQ ILIKSVKNSL QPRIRFLVQV MGRGMDEVAS YPEFFHHGLK KKVESRFKLV
301: KKNNIDCSLR EMLDCNTKKF HEKFGFSEVT ASF

Arabidopsis Description

pde191Mitochondrial transcription termination factor family protein [Source:UniProtKB/TrEMBL;Acc:F4JSY9]
SUBAcon: [cytosol,nucleus,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.