Factsheet for TraesCS7D01G248600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G250000.3	Wheat	cytosol	97.11	90.69
TraesCS7B01G141200.1	Wheat	cytosol	96.78	90.39
Os08t0515800-01	Rice	cytosol	85.85	80.18
HORVU7Hr1G051550.3	Barley	mitochondrion	95.5	76.74
EES14251	Sorghum	cytosol	81.99	76.35
Zm00001d049743_P001	Maize	cytosol, mitochondrion, nucleus	79.1	73.65
GSMUA_AchrUn_...	Banana	cytosol	56.59	53.17
Solyc11g044360.1.1	Tomato	cytosol	51.77	50.79
KRH19886	Soybean	cytosol	53.38	49.55
KRH32500	Soybean	cytosol	53.05	49.25
PGSC0003DMT400059549	Potato	cytosol	51.77	49.09
VIT_03s0038g04180.t01	Wine grape	cytosol, plastid	54.34	47.74
GSMUA_Achr7P20690_001	Banana	cytosol	33.12	46.61
Bra012812.1-P	Field mustard	cytosol	50.16	46.57
CDY29073	Canola	cytosol, plastid	50.16	46.57
CDX90610	Canola	cytosol	50.16	46.57
AT4G38160.3	Thale cress	cytosol, nucleus, peroxisome	52.09	42.86
TraesCS6D01G196900.1	Wheat	plastid	27.01	17.32
TraesCS4D01G156100.1	Wheat	mitochondrion	15.43	15.29
TraesCS5D01G432100.1	Wheat	plastid	15.11	14.37
TraesCS1D01G252000.1	Wheat	plastid	22.83	14.2
TraesCS6D01G325000.1	Wheat	mitochondrion	21.22	13.44
TraesCS6D01G188800.1	Wheat	plastid	11.9	13.21
TraesCS5D01G372800.1	Wheat	plastid	24.44	12.99
TraesCS2D01G198500.1	Wheat	plastid	18.97	12.53
TraesCS2D01G255600.1	Wheat	mitochondrion	21.54	11.07

Protein Annotations

EnsemblPlants:TraesCS7D01G248600.1	EnsemblPlantsGene:TraesCS7D01G248600	Gene3D:1.25.70.10	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003690	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR038538	InterPro:MTERF	InterPro:MTERF_sf	PANTHER:PTHR13068
PANTHER:PTHR13068:SF5	PFAM:PF02536	SMART:SM00733	MapMan:15.6.2.2	:	:

Description

No Description!

Coordinates

chr7D:-:220277325..220279144

Molecular Weight (calculated)

35471.0 Da

IEP (calculated)

10.150

GRAVY (calculated)

-0.105

Length

311 amino acids

Sequence
(BLAST)

001: MASVGGDAKK SLTQWLGEKG FDEEAIRRMS KRCRNLPNLD AGEASGVWDY LLNDVKIEHR KLRYVVTKCP KVLTMSVNDK LIPTVQCLTT LQAKPGEIAQ
101: AIIKFPPILF HSVEEKLCPL LAFFQTLAIS EKQLAKLLMV NPRLISYSIQ AKFSQTVDFL VGLGIDREVM IGKILTKEPY IMGYSIDKRL RPTAEFLKSA
201: VGLQGSYLQR VIMNFPSILS RDVDKTLRPN LVFLQSTGFS KDQIMKLVAG YPPVLIKSIK HCLEPRVKFL VEEMGRDKGE VVDYPQFFHH GLKRSLEYRH
301: KILKQMNSRW I

Best Arabidopsis Sequence Match ( AT4G38160.2 )
(BLAST)

001: MEVTNTSSIM WFFRDKGFDD PSIDKMLRKC KQLEKAQSDV ASENWDYLSN IVGIQERKLP YIVSRCPKIL TLRLDERLIP MVECLSSLGR NPREVASAIT
101: KFPPILSHSV EEKLCPLLAF FQALGVPETQ LGKMILFNPR LISYSIDTKL TVIVSFLASL GLDQDGMIGK VLVKNPFLMG YSVDKRLRPT TEFLKSSVGL
201: SEDGIKSVVM NFPQLLCRDV NKILKPNYDY LKECGFGDSQ IATMVTGYPQ ILIKSVKNSL QPRIRFLVQV MGRGMDEVAS YPEFFHHGLK KKVESRFKLV
301: KKNNIDCSLR EMLDCNTKKF HEKFGFSEVF NCNQNGMYML LDKSVSLLAC DYCSNRQAKE VSA

Arabidopsis Description

pde191Mitochondrial transcription termination factor family protein [Source:UniProtKB/TrEMBL;Acc:F4JSY9]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.