Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g044360.1.1 | Tomato | cytosol | 94.82 | 98.11 |
| KRH19886 | Soybean | cytosol | 68.6 | 67.16 |
| KRH32500 | Soybean | cytosol | 68.29 | 66.87 |
| VIT_03s0038g04180.t01 | Wine grape | cytosol, plastid | 71.04 | 65.82 |
| GSMUA_AchrUn_... | Banana | cytosol | 60.67 | 60.12 |
| Bra012812.1-P | Field mustard | cytosol | 60.67 | 59.4 |
| CDX90610 | Canola | cytosol | 60.67 | 59.4 |
| CDY29073 | Canola | cytosol, plastid | 60.67 | 59.4 |
| GSMUA_Achr7P20690_001 | Banana | cytosol | 39.33 | 58.37 |
| Os08t0515800-01 | Rice | cytosol | 57.93 | 57.06 |
| EES14251 | Sorghum | cytosol | 57.32 | 56.29 |
| AT4G38160.3 | Thale cress | cytosol, nucleus, peroxisome | 64.63 | 56.08 |
| Zm00001d049743_P001 | Maize | cytosol, mitochondrion, nucleus | 56.71 | 55.69 |
| TraesCS7B01G141200.1 | Wheat | cytosol | 54.27 | 53.45 |
| TraesCS7A01G250000.3 | Wheat | cytosol | 54.27 | 53.45 |
| TraesCS7D01G248600.1 | Wheat | cytosol | 49.09 | 51.77 |
| HORVU7Hr1G051550.3 | Barley | mitochondrion | 54.57 | 46.25 |
| PGSC0003DMT400047490 | Potato | mitochondrion | 7.32 | 25.53 |
| PGSC0003DMT400075363 | Potato | cytosol | 15.24 | 24.04 |
| PGSC0003DMT400076662 | Potato | cytosol | 19.21 | 21.58 |
| PGSC0003DMT400080487 | Potato | plastid | 20.12 | 21.29 |
| PGSC0003DMT400001905 | Potato | plastid | 16.46 | 19.22 |
| PGSC0003DMT400085903 | Potato | plastid | 18.29 | 18.75 |
| PGSC0003DMT400047424 | Potato | plastid | 17.99 | 18.55 |
| PGSC0003DMT400052092 | Potato | mitochondrion | 24.39 | 16.53 |
| PGSC0003DMT400023814 | Potato | mitochondrion | 23.48 | 15.65 |
| PGSC0003DMT400007420 | Potato | mitochondrion | 21.34 | 14.68 |
| PGSC0003DMT400001588 | Potato | plastid | 21.65 | 13.71 |
| PGSC0003DMT400023772 | Potato | plastid | 24.09 | 13.23 |
| PGSC0003DMT400001916 | Potato | plastid | 23.48 | 11.18 |
Protein Annotations
| Gene3D:1.25.70.10 | EntrezGene:102585837 | MapMan:15.6.2.2 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003690 | GO:GO:0003723 | GO:GO:0003727 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009579 | GO:GO:0009658 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0042651 |
| InterPro:IPR038538 | UniProt:M1C4E4 | InterPro:MTERF | InterPro:MTERF_sf | PFAM:PF02536 | EnsemblPlantsGene:PGSC0003DMG400023133 |
| PGSC:PGSC0003DMG400023133 | EnsemblPlants:PGSC0003DMT400059549 | PANTHER:PTHR13068 | PANTHER:PTHR13068:SF5 | SMART:SM00733 | UniParc:UPI000295CFF8 |
| RefSeq:XP_006352102.1 | SEG:seg | : | : | : | : |
Description
PDE191 [Source:PGSC_GENE;Acc:PGSC0003DMG400023133]
Coordinates
chr11:-:30337792..30339600
Molecular Weight (calculated)
37479.3 Da
IEP (calculated)
9.455
GRAVY (calculated)
-0.103
Length
328 amino acids
Sequence
(BLAST)
(BLAST)
001: METSNSHSSG IMWFFKDKGF DDTSINEMFQ KCKRLEGVQR EKASENWDYL RSIGIQERKL PSVVRKCPKI LTLGLHEKLF PMVNCLETLG SKPQEVASAI
101: TKFPHILAHS VEEKLCPLLG FFEALGVTEK QLGKMILINP RIISYSIEHK LSQMVEFLSS LHLAKDGMIG KVIVKHPYIM GYSVDNRLRP TSEFLKSLGL
201: TDMDLQKVVI NYPEVLCRDV NKILQPNLSY LTSRGFGVGQ IAAVVTCYPP VLIKSVSNSL EPRIKFLIDV MGRGLDEVVD YPDYFRHSLK RRLQLRQKLL
301: MQKNISCTLS EMLDCNQKKF LFKFGLVQ
101: TKFPHILAHS VEEKLCPLLG FFEALGVTEK QLGKMILINP RIISYSIEHK LSQMVEFLSS LHLAKDGMIG KVIVKHPYIM GYSVDNRLRP TSEFLKSLGL
201: TDMDLQKVVI NYPEVLCRDV NKILQPNLSY LTSRGFGVGQ IAAVVTCYPP VLIKSVSNSL EPRIKFLIDV MGRGLDEVVD YPDYFRHSLK RRLQLRQKLL
301: MQKNISCTLS EMLDCNQKKF LFKFGLVQ
001: MEVTNTSSIM WFFRDKGFDD PSIDKMLRKC KQLEKAQSDV ASENWDYLSN IVGIQERKLP YIVSRCPKIL TLRLDERLIP MVECLSSLGR NPREVASAIT
101: KFPPILSHSV EEKLCPLLAF FQALGVPETQ LGKMILFNPR LISYSIDTKL TVIVSFLASL GLDQDGMIGK VLVKNPFLMG YSVDKRLRPT TEFLKSSVGL
201: SEDGIKSVVM NFPQLLCRDV NKILKPNYDY LKECGFGDSQ IATMVTGYPQ ILIKSVKNSL QPRIRFLVQV MGRGMDEVAS YPEFFHHGLK KKVESRFKLV
301: KKNNIDCSLR EMLDCNTKKF HEKFGFSEVT ASF
101: KFPPILSHSV EEKLCPLLAF FQALGVPETQ LGKMILFNPR LISYSIDTKL TVIVSFLASL GLDQDGMIGK VLVKNPFLMG YSVDKRLRPT TEFLKSSVGL
201: SEDGIKSVVM NFPQLLCRDV NKILKPNYDY LKECGFGDSQ IATMVTGYPQ ILIKSVKNSL QPRIRFLVQV MGRGMDEVAS YPEFFHHGLK KKVESRFKLV
301: KKNNIDCSLR EMLDCNTKKF HEKFGFSEVT ASF
Arabidopsis Description
pde191Mitochondrial transcription termination factor family protein [Source:UniProtKB/TrEMBL;Acc:F4JSY9]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.