Factsheet for PGSC0003DMT400023814

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g017050.1.1	Tomato	extracellular	96.34	95.18
VIT_11s0016g02240.t01	Wine grape	mitochondrion	77.85	79.63
KRH60420	Soybean	cytosol	63.01	75.98
Bra004800.1-P	Field mustard	cytosol	67.68	74.5
KRH41721	Soybean	mitochondrion	75.41	74.35
AT2G44020.1	Thale cress	mitochondrion	72.15	70.02
CDX79786	Canola	mitochondrion	69.92	69.78
CDY17890	Canola	mitochondrion	70.53	69.68
GSMUA_Achr10P...	Banana	mitochondrion	48.78	64.69
Os02t0783100-01	Rice	mitochondrion	61.38	62.27
TraesCS6D01G325000.1	Wheat	mitochondrion	60.57	60.69
Zm00001d052081_P003	Maize	mitochondrion	60.16	60.53
EES07645	Sorghum	mitochondrion	59.96	60.33
TraesCS6B01G376100.1	Wheat	mitochondrion	60.16	60.29
HORVU6Hr1G082970.1	Barley	cytosol	60.37	56.36
TraesCS6A01G343900.1	Wheat	plastid	60.16	54.81
PGSC0003DMT400007420	Potato	mitochondrion	47.15	48.64
PGSC0003DMT400047490	Potato	mitochondrion	6.1	31.91
PGSC0003DMT400075363	Potato	cytosol	10.98	25.96
PGSC0003DMT400059549	Potato	cytosol	15.65	23.48
PGSC0003DMT400085903	Potato	plastid	14.23	21.88
PGSC0003DMT400076662	Potato	cytosol	12.4	20.89
PGSC0003DMT400047424	Potato	plastid	13.21	20.44
PGSC0003DMT400080487	Potato	plastid	12.2	19.35
PGSC0003DMT400001905	Potato	plastid	10.57	18.51
PGSC0003DMT400052092	Potato	mitochondrion	17.68	17.98
PGSC0003DMT400001588	Potato	plastid	16.87	16.02
PGSC0003DMT400023772	Potato	plastid	18.29	15.08
PGSC0003DMT400001916	Potato	plastid	19.31	13.79

Protein Annotations

Gene3D:1.25.70.10	EntrezGene:102593486	MapMan:15.6.2.2	MapMan:16.12.2.2.1.5	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003690	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR038538	UniProt:M1AJ09	InterPro:MTERF
InterPro:MTERF_sf	PFAM:PF02536	EnsemblPlantsGene:PGSC0003DMG400009215	PGSC:PGSC0003DMG400009215	EnsemblPlants:PGSC0003DMT400023814	PANTHER:PTHR13068
PANTHER:PTHR13068:SF8	SMART:SM00733	UniParc:UPI0002969C62	RefSeq:XP_006351168.1	SEG:seg	:

Description

MTERF family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400009215]

Coordinates

chr11:-:9020508..9022239

Molecular Weight (calculated)

56583.7 Da

IEP (calculated)

8.552

GRAVY (calculated)

-0.113

Length

492 amino acids

Sequence
(BLAST)

001: MTSIIRRNQS LKTIFRNPKD PFFNPIYKIP YRVLNQKPFS THSSKFPEYE MPTVTWGVVQ GRKEKLVSRV IISDYLKTIG IIPHELEELE LPSAVEVMRE
101: RVEFLQKIGL TVDDMNEYPL MLGCSVRKNI IPVLTYLEKI GLQRSKLGEF IKIYPQCLHT SVVVELVPVI KFLRGLDVEK QDIGYVLMKY PELLGFKLEG
201: TMSTSVAYLV SIGVNPRDVG PMVTQYPYFL GMRVGTMIKP LVDYLVSLGL PKKMLARMLE KRAYLLGYDL EETVKPNVNC LLSFGLRKDT LPSVIAQFPQ
301: ILGLPLKAKL SSQQYFFNLK LKIDPDGFAR VIEKMPQIVS LHQHVIMKPV EFLVGRGFST ADVAKMIVKC PQLVALQVGL MKNSYYFFKS DMGRPMEELL
401: DFPDYFTYSL ESRIKPRYQR LQNKEIRCSL GWFLNCSDQR FEERLYGDYI EPESSGPSFC MGGKLELPGN EIVSEEEDDS EDETLYRRTV SL

Best Arabidopsis Sequence Match ( AT2G44020.1 )
(BLAST)

001: MSYLLRRNKF VALLKRQSLI FPITSTEAKT LINPDPNIPQ FQNPCSIFRI AHYATQSSKF PEYEMPTVTW GVIQGKKEKL VNRVKICDYL KGLGIITDEL
101: ESIELPSTIE VMCERVEFLQ KLGLTIDDIN EYPLMLGCSV RKNLIPVLAY LEKIGISRSK LGEFVKNYPQ VLHASVVVEL APVVKFLRGL DVEKQDLGYV
201: LMKYPELLGF KLEGTMSTSV AYLVSIGVSP RDIGPMVTQY PYLLGMRVGT MIKPLVDYLI SIGLPKKIVA RMLEKRSYIV GYNLEETVKP NVDCLISFGV
301: KKELLPLLIA QYPQILGLPV KAKMSTQQYF FSLKLKIDPE GFARVVEKMP QIVSLKQNVI MKPIEFLLGR AFQVEDIAKM VVRCPQILCS RVELMKNSYY
401: FYKTEMGRPM KELVEYPEYF TYSLESRIKP RYQKLQSKGI RSSLNWFLNC SDQRFEERLQ GNFIDPDTEG PTFDMGGKLE MPGGEIVTDE EEDESDDEVL
501: YRRTLTL

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:O80572]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.