Factsheet for VIT_11s0016g02240.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH60420	Soybean	cytosol	68.4	80.64
PGSC0003DMT400023814	Potato	mitochondrion	79.63	77.85
Bra004800.1-P	Field mustard	cytosol	72.14	77.63
KRH41721	Soybean	mitochondrion	80.46	77.56
Solyc11g017050.1.1	Tomato	extracellular	79.42	76.71
CDX79786	Canola	mitochondrion	75.05	73.23
CDY17890	Canola	mitochondrion	75.26	72.69
AT2G44020.1	Thale cress	mitochondrion	76.51	72.58
GSMUA_Achr10P...	Banana	mitochondrion	50.94	66.04
Os02t0783100-01	Rice	mitochondrion	63.62	63.09
Zm00001d052081_P003	Maize	mitochondrion	63.83	62.78
TraesCS6D01G325000.1	Wheat	mitochondrion	64.03	62.73
EES07645	Sorghum	mitochondrion	63.62	62.58
TraesCS6B01G376100.1	Wheat	mitochondrion	62.99	61.71
HORVU6Hr1G082970.1	Barley	cytosol	63.2	57.69
TraesCS6A01G343900.1	Wheat	plastid	63.62	56.67
VIT_07s0104g00720.t01	Wine grape	mitochondrion	49.9	45.71
VIT_03s0063g02460.t01	Wine grape	plastid	13.51	23.55
VIT_01s0010g03740.t01	Wine grape	plastid	13.1	20.13
VIT_08s0007g02500.t01	Wine grape	plastid	13.93	19.82
VIT_03s0038g04180.t01	Wine grape	cytosol, plastid	14.35	19.49
VIT_10s0003g04040.t01	Wine grape	plastid	14.14	19.32
VIT_03s0063g02590.t01	Wine grape	cytosol	20.37	17.22
VIT_14s0171g00230.t01	Wine grape	plastid	17.67	17.17
VIT_09s0054g01030.t01	Wine grape	plastid	18.5	14.81
VIT_19s0090g01770.t01	Wine grape	plastid	14.76	14.12
VIT_16s0098g00970.t01	Wine grape	plastid	19.13	4.56

Protein Annotations

Gene3D:1.25.70.10	EntrezGene:100255927	wikigene:100255927	MapMan:15.6.2.2	MapMan:16.12.2.2.1.5	ProteinID:CCB51447
ProteinID:CCB51447.1	UniProt:F6HGW4	EMBL:FN595756	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003690	GO:GO:0003723	GO:GO:0003727	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0008380	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009658	GO:GO:0009987
GO:GO:0016043	GO:GO:0019843	GO:GO:0032502	GO:GO:0042255	InterPro:IPR038538	EntrezGene:LOC100255927
wikigene:LOC100255927	InterPro:MTERF	InterPro:MTERF_sf	PFAM:PF02536	PANTHER:PTHR13068	PANTHER:PTHR13068:SF8
SMART:SM00733	UniParc:UPI00015C8A31	ArrayExpress:VIT_11s0016g02240	EnsemblPlantsGene:VIT_11s0016g02240	EnsemblPlants:VIT_11s0016g02240.t01	unigene:Vvi.20573
RefSeq:XP_002279655	RefSeq:XP_002279655.1	RefSeq:XP_010656198.1	RefSeq:XP_010656199.1	SEG:seg	:

Description

No Description!

Coordinates

chr11:-:1835708..1837177

Molecular Weight (calculated)

54893.8 Da

IEP (calculated)

8.656

GRAVY (calculated)

0.022

Length

481 amino acids

Sequence
(BLAST)

001: MISLLRRTKL LTLTLTSNPR TLRPFLRFLS SSSKFPEYEM PSVTWGVVLG RKERLVSRVI ISDYLKTLGI IPDELEQVEL PSTVEVMRER VEFLQKLGVT
101: IDHLNEYPLM LGCSVRKNMI PVLGYLEKIG IPRSKLGEFV VNYPQVLHAS VVVELAPVVK FLRGLDVDKQ DIGYVLMKYP ELLGFKLEGT MSTSVAYLVS
201: IGVSPRDIGP MVTQYPYFLG MRVGTVIKPI VDYLVSLGLP KKVLARMFEK RAYVLGYDLE ECIKPNVDCL VSFGIRREAL ASVIAQFPQI LGLPLKAKLS
301: SQQYFFNLKL KIDPDGFARV IERMPQIVSL NQNVIMKPVE FLLGRGIPAV DVAKMVVKCP QLVALRVELM KNGYYFFKSE MGRQVKELVE FPEYFTYSLE
401: SRIKPRYQRL QSKGVRSSLD WFLNCSDQRF EERLQADYIE METIGPSFCM GGKLQLPGNE VVSDEEDESD DEELYRRTVS L

Best Arabidopsis Sequence Match ( AT2G44020.1 )
(BLAST)

001: MSYLLRRNKF VALLKRQSLI FPITSTEAKT LINPDPNIPQ FQNPCSIFRI AHYATQSSKF PEYEMPTVTW GVIQGKKEKL VNRVKICDYL KGLGIITDEL
101: ESIELPSTIE VMCERVEFLQ KLGLTIDDIN EYPLMLGCSV RKNLIPVLAY LEKIGISRSK LGEFVKNYPQ VLHASVVVEL APVVKFLRGL DVEKQDLGYV
201: LMKYPELLGF KLEGTMSTSV AYLVSIGVSP RDIGPMVTQY PYLLGMRVGT MIKPLVDYLI SIGLPKKIVA RMLEKRSYIV GYNLEETVKP NVDCLISFGV
301: KKELLPLLIA QYPQILGLPV KAKMSTQQYF FSLKLKIDPE GFARVVEKMP QIVSLKQNVI MKPIEFLLGR AFQVEDIAKM VVRCPQILCS RVELMKNSYY
401: FYKTEMGRPM KELVEYPEYF TYSLESRIKP RYQKLQSKGI RSSLNWFLNC SDQRFEERLQ GNFIDPDTEG PTFDMGGKLE MPGGEIVTDE EEDESDDEVL
501: YRRTLTL

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:O80572]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.