CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH60420	Soybean	cytosol	76.35	93.38
VIT_11s0016g02240.t01	Wine grape	mitochondrion	77.56	80.46
Bra004800.1-P	Field mustard	cytosol	69.54	77.63
PGSC0003DMT400023814	Potato	mitochondrion	74.35	75.41
Solyc11g017050.1.1	Tomato	extracellular	74.15	74.3
CDX79786	Canola	mitochondrion	72.34	73.23
CDY17890	Canola	mitochondrion	72.55	72.69
AT2G44020.1	Thale cress	mitochondrion	73.75	72.58
GSMUA_Achr10P...	Banana	mitochondrion	49.3	66.31
EES07645	Sorghum	mitochondrion	60.12	61.35
TraesCS6D01G325000.1	Wheat	mitochondrion	60.12	61.1
Os02t0783100-01	Rice	mitochondrion	59.32	61.03
Zm00001d052081_P003	Maize	mitochondrion	59.52	60.74
TraesCS6B01G376100.1	Wheat	mitochondrion	59.52	60.49
HORVU6Hr1G082970.1	Barley	cytosol	59.52	56.36
TraesCS6A01G343900.1	Wheat	plastid	60.32	55.74
KRH72610	Soybean	plastid	46.09	44.4
KRH40190	Soybean	cytosol	6.81	30.91
KRH74890	Soybean	cytosol, plasma membrane, plastid	13.23	24.91
KRH70749	Soybean	plastid	14.63	24.75
KRH01028	Soybean	plastid	12.83	23.36
KRH12828	Soybean	plastid	13.83	22.85
KRH19886	Soybean	cytosol	15.03	22.39
KRH32500	Soybean	cytosol	15.03	22.39
KRH37793	Soybean	plastid	14.43	22.36
KRH13722	Soybean	plastid	14.43	21.18
KRH43735	Soybean	plastid	14.03	20.71
KRH39012	Soybean	cytosol	17.84	19.91
KRG94311	Soybean	plastid	18.64	19.66
KRH57654	Soybean	mitochondrion, plastid	18.64	19.38
KRH24469	Soybean	plastid	19.44	15.54
KRH09594	Soybean	cytosol	18.24	15.37
KRH73870	Soybean	plastid	14.83	15.1
KRH14270	Soybean	plastid	14.63	14.69
KRH64303	Soybean	nucleus	14.63	14.66
KRH29455	Soybean	mitochondrion	13.43	11.8

Protein Annotations

Gene3D:1.25.70.10	EntrezGene:100809590	MapMan:15.6.2.2	MapMan:16.12.2.2.1.5	EMBL:ACUP02004777	EnsemblPlantsGene:GLYMA_08G046300
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003690	GO:GO:0003723	GO:GO:0003727
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0008380	GO:GO:0009058	GO:GO:0009507
GO:GO:0009536	GO:GO:0009658	GO:GO:0009987	GO:GO:0016043	GO:GO:0019843	GO:GO:0032502
GO:GO:0042255	UniProt:I1KQC1	InterPro:IPR038538	EnsemblPlants:KRH41721	ProteinID:KRH41721	ProteinID:KRH41721.1
InterPro:MTERF	InterPro:MTERF_sf	PFAM:PF02536	PANTHER:PTHR13068	PANTHER:PTHR13068:SF8	SMART:SM00733
UniParc:UPI0002337F4C	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:3645627..3647126

Molecular Weight (calculated)

56771.0 Da

IEP (calculated)

8.704

GRAVY (calculated)

-0.059

Length

499 amino acids

Sequence
(BLAST)

001: MVARRKVLNL LSTLIPHHAN AFSRHPHDHN PFTKIPKTLF RVYYGTQSSA SKLPEYEMPS VTWGVIQGRK EKLVSRVIIF DYLKGLGIIP DELHDLELPS
101: TVDVMRERVE FLQKLGLTVD DINNYPLMLG CSVRKNMIPV LGYLEKIGIA RPKLGGFVKN YPQVLHASVI VELAPVVKFL RGLDVEKDDI GYVLQKYPEL
201: LGFKLEGTMS TSVAYLVSIG VNPRDIGPMV TQYPYLLGMR VGTVIKPMID YLVDLGLPKK VLARMLEKRA YVLGYDLEET VKPNVECLIS FGVGRDCLAS
301: IIAQYPQILG LPLKAKLSTQ QYFFSLKLKV DPEGFARVVE NMPQVVSLHQ HVIMKPVEFL LGRTIPAQDV ASMVVKCPQL VALRVELMKN SYYFFKSEMG
401: RPLQELVEFP EYFTYSLESR IKPRYQRLKS KGIRCSLNWM LNCSDQRFEE RLQGHYIETE SVGPRFCMGG KLELPGNGLV SDEEEESDDE LLYRRTVSL

Best Arabidopsis Sequence Match ( AT2G44020.1 )
(BLAST)

001: MSYLLRRNKF VALLKRQSLI FPITSTEAKT LINPDPNIPQ FQNPCSIFRI AHYATQSSKF PEYEMPTVTW GVIQGKKEKL VNRVKICDYL KGLGIITDEL
101: ESIELPSTIE VMCERVEFLQ KLGLTIDDIN EYPLMLGCSV RKNLIPVLAY LEKIGISRSK LGEFVKNYPQ VLHASVVVEL APVVKFLRGL DVEKQDLGYV
201: LMKYPELLGF KLEGTMSTSV AYLVSIGVSP RDIGPMVTQY PYLLGMRVGT MIKPLVDYLI SIGLPKKIVA RMLEKRSYIV GYNLEETVKP NVDCLISFGV
301: KKELLPLLIA QYPQILGLPV KAKMSTQQYF FSLKLKIDPE GFARVVEKMP QIVSLKQNVI MKPIEFLLGR AFQVEDIAKM VVRCPQILCS RVELMKNSYY
401: FYKTEMGRPM KELVEYPEYF TYSLESRIKP RYQKLQSKGI RSSLNWFLNC SDQRFEERLQ GNFIDPDTEG PTFDMGGKLE MPGGEIVTDE EEDESDDEVL
501: YRRTLTL

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:O80572]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.