CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH29455	Soybean	mitochondrion	81.73	89.79
VIT_03s0063g02590.t01	Wine grape	cytosol	61.54	67.49
TraesCS2A01G255200.1	Wheat	cytosol	43.11	58.1
CDY66820	Canola	plastid	57.53	57.72
Bra031213.1-P	Field mustard	plastid	57.85	57.58
CDY13794	Canola	plastid	57.69	57.42
AT2G21710.1	Thale cress	plastid	57.69	56.16
PGSC0003DMT400001916	Potato	plastid	59.46	53.85
Solyc01g109630.2.1	Tomato	mitochondrion	59.78	52.91
OQU88410	Sorghum	plastid	50.64	52.49
TraesCS2D01G255600.1	Wheat	mitochondrion	50.48	52.07
TraesCS2B01G267000.1	Wheat	mitochondrion	50.48	51.98
Zm00001d018756_P001	Maize	plastid	50.32	51.31
Os07t0134700-00	Rice	plastid	48.56	49.84
GSMUA_Achr4P23060_001	Banana	mitochondrion	53.21	47.56
KRH40190	Soybean	cytosol	5.93	33.64
KRH12828	Soybean	plastid	12.98	26.82
KRH37793	Soybean	plastid	13.3	25.78
KRH74890	Soybean	cytosol, plasma membrane, plastid	10.58	24.91
KRH01028	Soybean	plastid	10.58	24.09
KRH19886	Soybean	cytosol	12.66	23.58
KRH70749	Soybean	plastid	11.06	23.39
KRH32500	Soybean	cytosol	12.5	23.28
KRH43735	Soybean	plastid	12.02	22.19
KRH13722	Soybean	plastid	12.02	22.06
KRH60420	Soybean	cytosol	13.14	20.1
KRH41721	Soybean	mitochondrion	15.54	19.44
KRH72610	Soybean	plastid	16.03	19.3
KRH39012	Soybean	cytosol	12.98	18.12
KRH09594	Soybean	cytosol	16.99	17.91
KRH57654	Soybean	mitochondrion, plastid	13.46	17.5
KRG94311	Soybean	plastid	13.14	17.34
KRH64303	Soybean	nucleus	13.46	16.87
KRH73870	Soybean	plastid	13.14	16.73
KRH14270	Soybean	plastid	12.82	16.1

Protein Annotations

Gene3D:1.25.70.10	EntrezGene:100813633	MapMan:15.6.2.2	EMBL:ACUP02007176	EnsemblPlantsGene:GLYMA_12G043100	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003690	GO:GO:0003723	GO:GO:0003727	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0008380	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536
GO:GO:0009658	GO:GO:0009987	GO:GO:0016043	GO:GO:0019843	GO:GO:0032502	GO:GO:0042255
UniProt:I1LQ35	InterPro:IPR038538	EnsemblPlants:KRH24469	ProteinID:KRH24469	ProteinID:KRH24469.1	ProteinID:KRH24470.1
InterPro:MTERF	InterPro:MTERF_sf	PFAM:PF02536	PANTHER:PTHR13068	PANTHER:PTHR13068:SF4	SMART:SM00733
UniParc:UPI00023D0B73	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr12:+:3128278..3132475

Molecular Weight (calculated)

72065.4 Da

IEP (calculated)

9.521

GRAVY (calculated)

-0.209

Length

624 amino acids

Sequence
(BLAST)

001: MFFSCKTYNL YLPCSSVPLR NSTSCTIFNC QNPNEHHSIL RKHNSKSTAY LLHHLSHKDG APNPIPIPKP SELQDPMPHE EKVKVLELSL VRKRTPQFPG
101: SIYAQSPSDS DVGSSLPPLR TLFQSSDDKD EEEEEKEMIM RALDIRRKVT EEVFKEAMRK GKFGITYTTN LVGRLSGFID YIMIEAANLK RLPEYSNSTF
201: NLRAKIVIDD SKVVPLIRWL KHNALSYPRI AKLILMSSGK LEAVRSFVEW LKSVHVKGEF LGVVMVNAGE NIFQRSHVEL DEIVLYLESN GVRRDWMGYV
301: ISRCPQLLSY SLDEVKNRAQ FYHDMGLNEK DFGTMVFDFP KVLGYYSLEE MNAKVNYLKE FGLQTKDVGR LLAFRPQLMA CSIEEQWKPL VKYLYYYGIT
401: QDGMRRMLTI KPMVFCADLQ MTIVPKVRFF EDIGVRNDAI GNMLVKFPPL LTYSLNKKIR PVVIFLMTKA GVSEKDIAKV VALGPELLGC NIAHKLDLNV
501: KYFLSLGIRL RQLGEMIADF PMLLRYNPDV LRPKYIYLRK TMVRPLQDLI EFPRFFSYSL EGRIIPRHKV LVENQINIKL RYMLTSTDEE FNKMVKGIIR
601: KRLRFESAVT NEDTTLILET TPQA

Best Arabidopsis Sequence Match ( AT2G21710.1 )
(BLAST)

001: MLLHCNVSYY TSTFSFISSS LRRQDNADDS QDTVIRRRHN ARSISLYIRH NRDLKLNKNP NESQETFVPP PPPPRRDLDG ENRSKLLELS LVTRRTPQFP
101: GSIYAQSASD ADIASSLPSL RNFLGSDGDD DGESEREMIV KALEIRRKVT KEIIKESLVR KGRFGITYAT NVTDRLGDFV DHVMIQAAAL KRLPEFSESR
201: FNLRARTVIE DSNFVPLVRW LKHHELSYNR IAKIICMSKG NLDSIRIMIE WLKSIHVKGE FIAVAFLRSG DNILQRNREE LNEIVEYLES NGVRRDWMGY
301: VVGRCPELLS FSMEEVKSRV DFFLKMGMNQ NDFGTMVYDY PKIIGFFSFQ VMEKKINYLK EFGLSTEEVG RLLAYKPHLM GCSIEERWKP LVKYFYYLGI
401: PKEGMKRILV VKPILYCIDL EKTIAPKVRF LQEMGIPNEA IGNMLVKFPS LLTNSLYKKI RPVVIFLLTR AGVTQKDIGK VIAMDPALLG CSIGTKLEPN
501: MRYYISLGIR FYQLGEMIAD FPMLLRYNVD NLRPKYRYLR RTMIRPLQDL IEFPRFFSYS LERRIIPRHT IMVENRVNFK LRYMLACTDE EFERRVRDKV
601: ERRERFEAGL DSEDSQPSDE NISDQEIAFS DEAEEEEDLT E

Arabidopsis Description

MTERF2Transcription termination factor MTERF2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4IHL3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.