Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- plastid 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY66820 | Canola | plastid | 86.74 | 89.39 |
| CDY13794 | Canola | plastid | 87.05 | 89.0 |
| Bra031213.1-P | Field mustard | plastid | 86.43 | 88.36 |
| VIT_03s0063g02590.t01 | Wine grape | cytosol | 55.38 | 62.39 |
| KRH24469 | Soybean | plastid | 56.16 | 57.69 |
| TraesCS2A01G255200.1 | Wheat | cytosol | 41.19 | 57.02 |
| PGSC0003DMT400001916 | Potato | plastid | 56.79 | 52.83 |
| KRH29455 | Soybean | mitochondrion | 46.65 | 52.64 |
| Solyc01g109630.2.1 | Tomato | mitochondrion | 56.63 | 51.49 |
| TraesCS2B01G267000.1 | Wheat | mitochondrion | 48.52 | 51.32 |
| TraesCS2D01G255600.1 | Wheat | mitochondrion | 48.36 | 51.24 |
| Os07t0134700-00 | Rice | plastid | 48.36 | 50.99 |
| OQU88410 | Sorghum | plastid | 47.27 | 50.33 |
| Zm00001d018756_P001 | Maize | plastid | 47.43 | 49.67 |
| GSMUA_Achr4P23060_001 | Banana | mitochondrion | 50.08 | 45.99 |
| AT2G03050.2 | Thale cress | cytosol, golgi, mitochondrion, plastid | 11.7 | 26.41 |
| AT2G34620.1 | Thale cress | plastid | 12.17 | 25.74 |
| AT2G36000.1 | Thale cress | plastid | 12.79 | 24.62 |
| AT3G18870.1 | Thale cress | plastid | 10.3 | 24.09 |
| AT4G38160.3 | Thale cress | cytosol, nucleus, peroxisome | 12.95 | 21.96 |
| AT4G02990.1 | Thale cress | plastid | 16.07 | 19.04 |
| AT4G14605.2 | Thale cress | cytosol | 14.35 | 18.66 |
| AT2G44020.1 | Thale cress | mitochondrion | 14.35 | 18.15 |
| AT1G78930.1 | Thale cress | plastid | 15.6 | 16.92 |
| AT5G55580.1 | Thale cress | plastid | 12.64 | 16.33 |
| AT5G54180.1 | Thale cress | plastid | 12.48 | 16.0 |
Protein Annotations
| Gene3D:1.25.70.10 | MapMan:15.6.2.2 | EntrezGene:816708 | ProteinID:AAD20391.1 | ProteinID:AAM15397.1 | ProteinID:AEC07213.1 |
| ArrayExpress:AT2G21710 | EnsemblPlantsGene:AT2G21710 | RefSeq:AT2G21710 | TAIR:AT2G21710 | RefSeq:AT2G21710-TAIR-G | EnsemblPlants:AT2G21710.1 |
| TAIR:AT2G21710.1 | Unigene:At.39539 | Symbol:EMB2219 | UniProt:F4IHL3 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003690 | GO:GO:0003723 | GO:GO:0003727 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006353 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008380 | GO:GO:0009058 | GO:GO:0009506 |
| GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009658 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0019843 |
| GO:GO:0032502 | GO:GO:0042255 | InterPro:IPR038538 | InterPro:MTERF | InterPro:MTERF_sf | RefSeq:NP_179763.3 |
| PFAM:PF02536 | PO:PO:0000005 | PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0004507 | PO:PO:0007115 | PO:PO:0007611 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009031 | PO:PO:0009046 | PO:PO:0025022 | PANTHER:PTHR13068 | PANTHER:PTHR13068:SF4 |
| SMART:SM00733 | UniParc:UPI0001739186 | SEG:seg | : | : | : |
Description
MTERF2Transcription termination factor MTERF2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4IHL3]
Coordinates
chr2:+:9270784..9273444
Molecular Weight (calculated)
74749.5 Da
IEP (calculated)
8.693
GRAVY (calculated)
-0.379
Length
641 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLHCNVSYY TSTFSFISSS LRRQDNADDS QDTVIRRRHN ARSISLYIRH NRDLKLNKNP NESQETFVPP PPPPRRDLDG ENRSKLLELS LVTRRTPQFP
101: GSIYAQSASD ADIASSLPSL RNFLGSDGDD DGESEREMIV KALEIRRKVT KEIIKESLVR KGRFGITYAT NVTDRLGDFV DHVMIQAAAL KRLPEFSESR
201: FNLRARTVIE DSNFVPLVRW LKHHELSYNR IAKIICMSKG NLDSIRIMIE WLKSIHVKGE FIAVAFLRSG DNILQRNREE LNEIVEYLES NGVRRDWMGY
301: VVGRCPELLS FSMEEVKSRV DFFLKMGMNQ NDFGTMVYDY PKIIGFFSFQ VMEKKINYLK EFGLSTEEVG RLLAYKPHLM GCSIEERWKP LVKYFYYLGI
401: PKEGMKRILV VKPILYCIDL EKTIAPKVRF LQEMGIPNEA IGNMLVKFPS LLTNSLYKKI RPVVIFLLTR AGVTQKDIGK VIAMDPALLG CSIGTKLEPN
501: MRYYISLGIR FYQLGEMIAD FPMLLRYNVD NLRPKYRYLR RTMIRPLQDL IEFPRFFSYS LERRIIPRHT IMVENRVNFK LRYMLACTDE EFERRVRDKV
601: ERRERFEAGL DSEDSQPSDE NISDQEIAFS DEAEEEEDLT E
101: GSIYAQSASD ADIASSLPSL RNFLGSDGDD DGESEREMIV KALEIRRKVT KEIIKESLVR KGRFGITYAT NVTDRLGDFV DHVMIQAAAL KRLPEFSESR
201: FNLRARTVIE DSNFVPLVRW LKHHELSYNR IAKIICMSKG NLDSIRIMIE WLKSIHVKGE FIAVAFLRSG DNILQRNREE LNEIVEYLES NGVRRDWMGY
301: VVGRCPELLS FSMEEVKSRV DFFLKMGMNQ NDFGTMVYDY PKIIGFFSFQ VMEKKINYLK EFGLSTEEVG RLLAYKPHLM GCSIEERWKP LVKYFYYLGI
401: PKEGMKRILV VKPILYCIDL EKTIAPKVRF LQEMGIPNEA IGNMLVKFPS LLTNSLYKKI RPVVIFLLTR AGVTQKDIGK VIAMDPALLG CSIGTKLEPN
501: MRYYISLGIR FYQLGEMIAD FPMLLRYNVD NLRPKYRYLR RTMIRPLQDL IEFPRFFSYS LERRIIPRHT IMVENRVNFK LRYMLACTDE EFERRVRDKV
601: ERRERFEAGL DSEDSQPSDE NISDQEIAFS DEAEEEEDLT E
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.