Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX84297 | Canola | plastid | 88.45 | 81.21 |
| Solyc02g021430.1.1 | Tomato | plastid | 60.07 | 59.48 |
| PGSC0003DMT400080487 | Potato | plastid | 60.4 | 59.03 |
| KRH12828 | Soybean | plastid | 58.75 | 58.94 |
| KRH37793 | Soybean | plastid | 59.74 | 56.21 |
| VIT_10s0003g04040.t01 | Wine grape | plastid | 63.37 | 54.55 |
| GSMUA_Achr6P31220_001 | Banana | plastid | 37.62 | 50.67 |
| Os03t0785200-01 | Rice | plastid | 48.51 | 47.42 |
| OQU90879 | Sorghum | plastid | 48.84 | 46.4 |
| TraesCS5A01G423600.1 | Wheat | plastid | 48.51 | 45.94 |
| Zm00001d011574_P001 | Maize | cytosol, extracellular, plastid | 23.1 | 45.75 |
| TraesCS5B01G425900.1 | Wheat | plastid | 49.51 | 45.73 |
| TraesCS5D01G432100.1 | Wheat | plastid | 48.84 | 45.26 |
| AT2G03050.2 | Thale cress | cytosol, golgi, mitochondrion, plastid | 38.61 | 41.2 |
| AT3G18870.1 | Thale cress | plastid | 31.35 | 34.67 |
| AT2G36000.1 | Thale cress | plastid | 33.99 | 30.93 |
| AT4G14605.2 | Thale cress | cytosol | 28.38 | 17.44 |
| AT5G55580.1 | Thale cress | plastid | 24.09 | 14.72 |
| AT4G38160.3 | Thale cress | cytosol, nucleus, peroxisome | 18.15 | 14.55 |
| AT4G02990.1 | Thale cress | plastid | 24.42 | 13.68 |
| AT2G44020.1 | Thale cress | mitochondrion | 22.44 | 13.41 |
| AT5G54180.1 | Thale cress | plastid | 21.12 | 12.8 |
| AT1G78930.1 | Thale cress | plastid | 24.42 | 12.52 |
| AT2G21710.1 | Thale cress | plastid | 25.74 | 12.17 |
Protein Annotations
| Gene3D:1.25.70.10 | MapMan:15.6.2.2 | EntrezGene:818027 | UniProt:A0A178VQZ0 | ProteinID:AAC26693.1 | ProteinID:AEC08999.1 |
| ArrayExpress:AT2G34620 | EnsemblPlantsGene:AT2G34620 | RefSeq:AT2G34620 | TAIR:AT2G34620 | RefSeq:AT2G34620-TAIR-G | EnsemblPlants:AT2G34620.1 |
| TAIR:AT2G34620.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003690 | GO:GO:0003723 |
| GO:GO:0003727 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008380 |
| GO:GO:0009058 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009628 | GO:GO:0009658 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0019843 | GO:GO:0032502 | GO:GO:0042255 | GO:GO:0042646 | GO:GO:0071472 |
| InterPro:IPR038538 | InterPro:MTERF | InterPro:MTERF_sf | RefSeq:NP_181009.1 | UniProt:O64685 | ProteinID:OAP08214.1 |
| PFAM:PF02536 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007057 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PANTHER:PTHR13068 | PANTHER:PTHR13068:SF78 | SMART:SM00733 | UniParc:UPI00000A1816 | : |
Description
Mitochondrial transcription termination factor family protein [Source:UniProtKB/TrEMBL;Acc:O64685]
Coordinates
chr2:+:14577083..14578382
Molecular Weight (calculated)
34255.1 Da
IEP (calculated)
8.274
GRAVY (calculated)
-0.020
Length
303 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAALSSSLY ISPKKPSCPQ QSQSTFLSTK PTTIKTNLHS HPLFTVADQT VTLQMKEKIL CLELMGIDSG KALSLNPCLC SAPLDSIQSV LHFLQSKGIY
101: PNDLPRILGM CPKILTSDVR TELYPVFMFL SNDLHVPENA FRRVIKKCPR LLISSVEDQL KPALFYLQRL GLKDLEALAY QDPILLVSSV EHTLIPKLRF
201: LESIGFSRPE AIGMILRCPA LFTFSIENNF KPKLDYFMSE IKGKLENLKE FPQYFAFSLE KRIKPRHLES MERGLELPLS LMLKSTDEEF EQLLTNPSSV
301: ANV
101: PNDLPRILGM CPKILTSDVR TELYPVFMFL SNDLHVPENA FRRVIKKCPR LLISSVEDQL KPALFYLQRL GLKDLEALAY QDPILLVSSV EHTLIPKLRF
201: LESIGFSRPE AIGMILRCPA LFTFSIENNF KPKLDYFMSE IKGKLENLKE FPQYFAFSLE KRIKPRHLES MERGLELPLS LMLKSTDEEF EQLLTNPSSV
301: ANV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.