Factsheet for TraesCS5B01G425900.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G432100.1	Wheat	plastid	97.56	97.86
TraesCS5A01G423600.1	Wheat	plastid	94.51	96.88
Os03t0785200-01	Rice	plastid	79.27	83.87
OQU90879	Sorghum	plastid	76.83	79.0
Zm00001d011574_P001	Maize	cytosol, extracellular, plastid	36.59	78.43
AT2G34620.1	Thale cress	plastid	45.73	49.51
KRH12828	Soybean	plastid	45.12	49.01
GSMUA_Achr6P31220_001	Banana	plastid	33.54	48.89
PGSC0003DMT400080487	Potato	plastid	46.04	48.71
Solyc02g021430.1.1	Tomato	plastid	45.12	48.37
VIT_10s0003g04040.t01	Wine grape	plastid	51.22	47.73
KRH37793	Soybean	plastid	44.82	45.65
CDX84297	Canola	plastid	45.73	45.45
TraesCS4B01G156500.1	Wheat	mitochondrion	26.22	27.39
TraesCS6B01G219200.1	Wheat	plastid	18.6	21.63
TraesCS6B01G244200.1	Wheat	plastid	22.87	15.5
TraesCS1B01G265700.1	Wheat	cytosol	20.43	15.47
TraesCS7B01G141200.1	Wheat	cytosol	15.55	15.32
TraesCS6B01G376100.1	Wheat	mitochondrion	21.95	14.66
TraesCS2B01G218100.1	Wheat	plastid	21.65	14.23
TraesCS2B01G267000.1	Wheat	mitochondrion	24.09	13.04
TraesCS5B01G365700.1	Wheat	plastid	20.73	11.62

Protein Annotations

Gene3D:1.25.70.10	MapMan:15.6.2.2	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003690
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139
GO:GO:0006355	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507
GO:GO:0009536	GO:GO:0009628	GO:GO:0009987	GO:GO:0042646	GO:GO:0071472	InterPro:IPR038538
InterPro:MTERF	InterPro:MTERF_sf	PFAM:PF02536	PANTHER:PTHR13068	PANTHER:PTHR13068:SF78	SMART:SM00733
EnsemblPlantsGene:TraesCS5B01G425900	EnsemblPlants:TraesCS5B01G425900.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr5B:-:601406011..601406997

Molecular Weight (calculated)

35763.5 Da

IEP (calculated)

8.931

GRAVY (calculated)

0.025

Length

328 amino acids

Sequence
(BLAST)

001: MPLCSFYAST SLPVAKPHSL PSSAKLPSTA AAAITTVQPK KSPPAVAAAA AATVLPTTAE NTASMTPAEA LSLHLPELPS AMRDKILSLE LMGVDYGRAL
101: SLNPALRDAA PESIHAVVTF LQSRGLHFKD LGRVFGMCPS VLTASVRADL RPVFAFLTDD LGVPEAAYRR VVVKCPRVLS CSVRDQLRPA LIYLRRLGFR
201: DNRALAFQDP ILLVSSVERT MAPKLEYLAG LGMSRDDAVA MALRCPALFT FNVERNYKPK FEYLVEEMGG GVEDVKAFPQ YFTFSLEKRI APRHRAAADA
301: GVDLPLPDML KATDEEFSEM LERRRRSG

Best Arabidopsis Sequence Match ( AT2G34620.1 )
(BLAST)

001: MSAALSSSLY ISPKKPSCPQ QSQSTFLSTK PTTIKTNLHS HPLFTVADQT VTLQMKEKIL CLELMGIDSG KALSLNPCLC SAPLDSIQSV LHFLQSKGIY
101: PNDLPRILGM CPKILTSDVR TELYPVFMFL SNDLHVPENA FRRVIKKCPR LLISSVEDQL KPALFYLQRL GLKDLEALAY QDPILLVSSV EHTLIPKLRF
201: LESIGFSRPE AIGMILRCPA LFTFSIENNF KPKLDYFMSE IKGKLENLKE FPQYFAFSLE KRIKPRHLES MERGLELPLS LMLKSTDEEF EQLLTNPSSV
301: ANV

Arabidopsis Description

Mitochondrial transcription termination factor family protein [Source:UniProtKB/TrEMBL;Acc:O64685]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.