Factsheet for TraesCS2B01G218100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G198500.1	Wheat	plastid	93.39	98.94
TraesCS2A01G189200.1	Wheat	plastid	98.4	98.4
HORVU2Hr1G036490.17	Barley	mitochondrion	94.79	94.04
EER97446	Sorghum	mitochondrion	79.16	78.06
Os07t0583200-01	Rice	endoplasmic reticulum, plastid	78.56	77.93
PGSC0003DMT400076662	Potato	cytosol	41.28	70.55
Zm00001d006700_P003	Maize	mitochondrion, plastid	78.56	68.06
GSMUA_Achr3P29890_001	Banana	plastid	60.12	59.17
KRH73870	Soybean	plastid	53.31	54.29
KRH14270	Soybean	plastid	53.91	54.12
Solyc12g015640.1.1	Tomato	plastid	51.3	53.11
Bra028970.1-P	Field mustard	plastid	50.5	51.22
CDY66686	Canola	extracellular, vacuole	50.5	51.12
CDY36755	Canola	nucleus, vacuole	50.5	51.12
AT5G55580.1	Thale cress	plastid	50.5	50.81
VIT_19s0090g01770.t01	Wine grape	plastid	46.89	46.52
TraesCS5B01G425900.1	Wheat	plastid	14.23	21.65
TraesCS4B01G156500.1	Wheat	mitochondrion	13.03	20.7
TraesCS6B01G219200.1	Wheat	plastid	10.82	19.15
TraesCS7B01G141200.1	Wheat	cytosol	12.63	18.92
TraesCS1B01G265700.1	Wheat	cytosol	15.43	17.78
TraesCS6B01G376100.1	Wheat	mitochondrion	16.23	16.5
TraesCS6B01G244200.1	Wheat	plastid	15.83	16.32
TraesCS2B01G267000.1	Wheat	mitochondrion	18.44	15.18
TraesCS5B01G365700.1	Wheat	plastid	16.63	14.19

Protein Annotations

Gene3D:1.25.70.10	MapMan:15.6.2.2	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003690
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139
GO:GO:0006355	GO:GO:0006950	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009507	GO:GO:0009536	GO:GO:0009628	GO:GO:0009651	GO:GO:0009658	GO:GO:0009987
GO:GO:0016043	GO:GO:0048364	GO:GO:0048367	InterPro:IPR038538	InterPro:MTERF	InterPro:MTERF_sf
PFAM:PF02536	PANTHER:PTHR13068	PANTHER:PTHR13068:SF13	SMART:SM00733	EnsemblPlantsGene:TraesCS2B01G218100	EnsemblPlants:TraesCS2B01G218100.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2B:-:206752275..206755388

Molecular Weight (calculated)

57307.0 Da

IEP (calculated)

9.897

GRAVY (calculated)

-0.495

Length

499 amino acids

Sequence
(BLAST)

001: MALLQLHPPP LAALGRSVLP CRPFPSATAT ARRSLASVAF SLQTNVRLLK PNRRSRRSRY PYYDLDDDEE EEDEEYDEDD ESEDDLSGLE YPGVLYTNNP
101: RAPNKRAGRK TQLVKENWEG RRPKTRDKHA SPGRSNSLHP RSKINRTLLN LTSMNSKVEL KNESISRSLF QKLQEEYDFD DKWLPLIDYL CSFGLRESHF
201: TYIYERHMAC LQINRASAEE RLEFLLSVGV KSKDLKRMLV RQPQILEYTL SNLKSHVAFL AGIGVPDARM GQIISSAPSF LSYSIEQSLK PTISYLIEEV
301: GIEESDVGKV VQLSPQILVQ RIDNAWKSRF LFLSKELGAP KDSIVKMVTK HPQLLHYSIE EGILPRINFL RSIGMRNSDI LKILTSLTQV LSLSVEKNLK
401: PKYLYLVNDL KNEAQSLTKY PMYLSLSLEQ RIRPRHRFLV SLKKAPKGPF PLSSFVLTDE RFCQRLAGTS LEKYHTFRQS LLLSGFEDKT GRKPLASRR

Best Arabidopsis Sequence Match ( AT5G55580.1 )
(BLAST)

001: MAGFSLYCFK NPRILFTLPS ESPLFVLGSD KCSPATRRPS RKTRGFVVTY AHSNPKIINP KKKSRYGQTL SPYDSDEDDD DDDDDDDDDW LLNDDFAEVT
101: EYEKKKPKSH KQTIAKKSVK KGIVKPEESE TDEDDLDLGI SPNATSEKKK ESWRLDGRGK MSSRKYVEKL YPRLAEEIDI DPKCVPLLDY LSTFGLKESH
201: FVQMYERHMP SLQINVFSAQ ERLDYLLSVG VKHRDIKRML LRQPQILQYT VENNLKAHIS FLMGLGIPNS KIGQIVAATP SLFSYSVENS LRPTIRYLIE
301: EVGIKETDVG KVVQLSPQIL VQRLDITWNT RYMFLSKELG APRDSVVKMV KKHPQLLHYS IDDGFLPRIN FLRSIGMCNS DILKVLTSLT QVLSLSLEDN
401: LKPKYMYLVN ELNNEVHILT KYPMYLSLSL DQRIRPRHRF LVELKKVRKG PFPLSSLVPN DESFCQQWAG TSVDTYLAFR QRLLLKEFAN KYDKRG

Arabidopsis Description

MTERF9Transcription termination factor MTERF9, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FM80]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.