Factsheet for Zm00001d006700_P003

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER97446	Sorghum	mitochondrion	82.29	93.68
TraesCS2D01G198500.1	Wheat	plastid	64.58	78.98
Os07t0583200-01	Rice	endoplasmic reticulum, plastid	68.75	78.73
TraesCS2B01G218100.1	Wheat	plastid	68.06	78.56
HORVU2Hr1G036490.17	Barley	mitochondrion	68.58	78.53
TraesCS2A01G189200.1	Wheat	plastid	67.36	77.76
PGSC0003DMT400076662	Potato	cytosol	36.63	72.26
GSMUA_Achr3P29890_001	Banana	plastid	52.26	59.37
KRH73870	Soybean	plastid	47.22	55.51
KRH14270	Soybean	plastid	47.57	55.13
CDY36755	Canola	nucleus, vacuole	45.83	53.55
Solyc12g015640.1.1	Tomato	plastid	44.79	53.53
Bra028970.1-P	Field mustard	plastid	45.66	53.46
AT5G55580.1	Thale cress	plastid	46.01	53.43
CDY66686	Canola	extracellular, vacuole	45.31	52.94
VIT_19s0090g01770.t01	Wine grape	plastid	40.8	46.72
Zm00001d029242_P001	Maize	plastid	11.46	21.78
Zm00001d047442_P001	Maize	plastid	10.94	21.14
Zm00001d011574_P001	Maize	cytosol, extracellular, plastid	4.86	18.3
Zm00001d049743_P001	Maize	cytosol, mitochondrion, nucleus	10.59	18.26
Zm00001d050886_P001	Maize	mitochondrion	8.68	17.92
Zm00001d017130_P001	Maize	plastid	14.58	17.28
Zm00001d010340_P001	Maize	plastid	13.54	15.79
Zm00001d052081_P003	Maize	mitochondrion	13.02	15.34
Zm00001d018756_P001	Maize	plastid	14.76	13.89
Zm00001d027230_P001	Maize	plastid	14.06	13.21
Zm00001d021376_P001	Maize	cytosol	14.24	12.77

Protein Annotations

Gene3D:1.25.70.10	EntrezGene:100285943	MapMan:15.6.2.2	UniProt:A0A1D6EZN9	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003690	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006139	GO:GO:0006355	GO:GO:0006950	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009628	GO:GO:0009651
GO:GO:0009658	GO:GO:0009987	GO:GO:0016043	GO:GO:0048364	GO:GO:0048367	InterPro:IPR038538
InterPro:MTERF	InterPro:MTERF_sf	ProteinID:ONM24741.1	ProteinID:ONM24744.1	PFAM:PF02536	PANTHER:PTHR13068
PANTHER:PTHR13068:SF13	SMART:SM00733	UniParc:UPI0008458DA7	EnsemblPlantsGene:Zm00001d006700	EnsemblPlants:Zm00001d006700_P003	EnsemblPlants:Zm00001d006700_T003
SEG:seg	:	:	:	:	:

Description

mTERF-domain protein9mTERF family protein

Coordinates

chr2:+:214673600..214677662

Molecular Weight (calculated)

65680.3 Da

IEP (calculated)

8.395

GRAVY (calculated)

-0.524

Length

576 amino acids

Sequence
(BLAST)

001: MALQLQLPRP LAAARPSILL PSPAHGASAS ATPLHARAGG VAFSLQTNVR LLKPNRRVRR SRDPYYDLDE DDEEEAEFDE DDEDDEEGYE SDDDLSGLEY
101: PGVLYSNSPR ASSKKPETVV TSCLNSNTPG LQTPVVKENW EGRQTKTHDK YGSPGRSKSM HPRSKVGRSS TDLKNMDREV ELKNASISRS LFQKLQEEYD
201: FDDKWLPLID YLCTFGLKES HFTYIYERHM ACFQISQASA EERLDFLLNA GVKSKDMKRI LVRQPQILEY TLGNLKSHVD FLVSIGVPNR RIGQIISAAP
301: SMFSYSVEQS LKPTVRYLIE EVGIEESDVG KVVQLSPQIL VQKIDSAWKS RSLFLSKELD APKHSIVKMV TKHPQLLHYS IEDGILPRLN FLRSIGMRNS
401: DILKVLTSLT QVLSLSLEDN LKPKYLYLVN DLKNEVQSLT KYPMYLSLSL DQRIRPRHRF LVSLKKAPKG PFPLSSFVPT DERFCQRWAG TSLEAYHTFR
501: QRLLLTSFAE KSGRKTLVSR RVYTASLTIA YTYRPYHLPN GEKSSPNSLN QLQMDDNLRE MHYCQSPEWL DGHLVT

Best Arabidopsis Sequence Match ( AT5G55580.1 )
(BLAST)

001: MAGFSLYCFK NPRILFTLPS ESPLFVLGSD KCSPATRRPS RKTRGFVVTY AHSNPKIINP KKKSRYGQTL SPYDSDEDDD DDDDDDDDDW LLNDDFAEVT
101: EYEKKKPKSH KQTIAKKSVK KGIVKPEESE TDEDDLDLGI SPNATSEKKK ESWRLDGRGK MSSRKYVEKL YPRLAEEIDI DPKCVPLLDY LSTFGLKESH
201: FVQMYERHMP SLQINVFSAQ ERLDYLLSVG VKHRDIKRML LRQPQILQYT VENNLKAHIS FLMGLGIPNS KIGQIVAATP SLFSYSVENS LRPTIRYLIE
301: EVGIKETDVG KVVQLSPQIL VQRLDITWNT RYMFLSKELG APRDSVVKMV KKHPQLLHYS IDDGFLPRIN FLRSIGMCNS DILKVLTSLT QVLSLSLEDN
401: LKPKYMYLVN ELNNEVHILT KYPMYLSLSL DQRIRPRHRF LVELKKVRKG PFPLSSLVPN DESFCQQWAG TSVDTYLAFR QRLLLKEFAN KYDKRG

Arabidopsis Description

MTERF9Transcription termination factor MTERF9, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FM80]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.