Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 2
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY36755 | Canola | nucleus, vacuole | 88.71 | 89.25 |
| Bra028970.1-P | Field mustard | plastid | 88.51 | 89.23 |
| CDY66686 | Canola | extracellular, vacuole | 87.1 | 87.63 |
| PGSC0003DMT400076662 | Potato | cytosol | 45.16 | 76.71 |
| KRH73870 | Soybean | plastid | 63.51 | 64.29 |
| KRH14270 | Soybean | plastid | 63.71 | 63.58 |
| Solyc12g015640.1.1 | Tomato | plastid | 56.85 | 58.51 |
| VIT_19s0090g01770.t01 | Wine grape | plastid | 56.65 | 55.86 |
| GSMUA_Achr3P29890_001 | Banana | plastid | 56.85 | 55.62 |
| EER97446 | Sorghum | mitochondrion | 54.03 | 52.96 |
| TraesCS2D01G198500.1 | Wheat | plastid | 48.99 | 51.59 |
| Os07t0583200-01 | Rice | endoplasmic reticulum, plastid | 52.22 | 51.49 |
| TraesCS2B01G218100.1 | Wheat | plastid | 50.81 | 50.5 |
| HORVU2Hr1G036490.17 | Barley | mitochondrion | 51.01 | 50.3 |
| TraesCS2A01G189200.1 | Wheat | plastid | 50.4 | 50.1 |
| Zm00001d006700_P003 | Maize | mitochondrion, plastid | 53.43 | 46.01 |
| AT2G03050.2 | Thale cress | cytosol, golgi, mitochondrion, plastid | 13.91 | 24.3 |
| AT2G34620.1 | Thale cress | plastid | 14.72 | 24.09 |
| AT3G18870.1 | Thale cress | plastid | 13.31 | 24.09 |
| AT2G36000.1 | Thale cress | plastid | 16.13 | 24.02 |
| AT4G38160.3 | Thale cress | cytosol, nucleus, peroxisome | 14.31 | 18.78 |
| AT2G44020.1 | Thale cress | mitochondrion | 16.33 | 15.98 |
| AT4G14605.2 | Thale cress | cytosol | 15.73 | 15.82 |
| AT4G02990.1 | Thale cress | plastid | 16.94 | 15.53 |
| AT1G78930.1 | Thale cress | plastid | 17.54 | 14.72 |
| AT5G54180.1 | Thale cress | plastid | 13.91 | 13.8 |
| AT2G21710.1 | Thale cress | plastid | 16.33 | 12.64 |
Protein Annotations
| Gene3D:1.25.70.10 | MapMan:15.6.2.2 | EntrezGene:835652 | ProteinID:AED96652.1 | ArrayExpress:AT5G55580 | EnsemblPlantsGene:AT5G55580 |
| RefSeq:AT5G55580 | TAIR:AT5G55580 | RefSeq:AT5G55580-TAIR-G | EnsemblPlants:AT5G55580.1 | TAIR:AT5G55580.1 | EMBL:AY062691 |
| Unigene:At.27411 | ProteinID:BAB09225.1 | EMBL:BT000141 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003690 | GO:GO:0003723 | GO:GO:0003727 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006353 | GO:GO:0006355 |
| GO:GO:0006950 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008380 | GO:GO:0009058 |
| GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009628 | GO:GO:0009651 | GO:GO:0009658 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0019843 | GO:GO:0042255 | GO:GO:0048364 | GO:GO:0048367 | InterPro:IPR038538 |
| InterPro:MTERF | InterPro:MTERF_sf | RefSeq:NP_200369.1 | PFAM:PF02536 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0020038 | PO:PO:0020137 | PO:PO:0025022 | PANTHER:PTHR13068 | PANTHER:PTHR13068:SF13 |
| UniProt:Q9FM80 | SMART:SM00733 | UniParc:UPI00000ABFDD | SEG:seg | : | : |
Description
MTERF9Transcription termination factor MTERF9, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FM80]
Coordinates
chr5:+:22515391..22517964
Molecular Weight (calculated)
57204.9 Da
IEP (calculated)
9.155
GRAVY (calculated)
-0.511
Length
496 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGFSLYCFK NPRILFTLPS ESPLFVLGSD KCSPATRRPS RKTRGFVVTY AHSNPKIINP KKKSRYGQTL SPYDSDEDDD DDDDDDDDDW LLNDDFAEVT
101: EYEKKKPKSH KQTIAKKSVK KGIVKPEESE TDEDDLDLGI SPNATSEKKK ESWRLDGRGK MSSRKYVEKL YPRLAEEIDI DPKCVPLLDY LSTFGLKESH
201: FVQMYERHMP SLQINVFSAQ ERLDYLLSVG VKHRDIKRML LRQPQILQYT VENNLKAHIS FLMGLGIPNS KIGQIVAATP SLFSYSVENS LRPTIRYLIE
301: EVGIKETDVG KVVQLSPQIL VQRLDITWNT RYMFLSKELG APRDSVVKMV KKHPQLLHYS IDDGFLPRIN FLRSIGMCNS DILKVLTSLT QVLSLSLEDN
401: LKPKYMYLVN ELNNEVHILT KYPMYLSLSL DQRIRPRHRF LVELKKVRKG PFPLSSLVPN DESFCQQWAG TSVDTYLAFR QRLLLKEFAN KYDKRG
101: EYEKKKPKSH KQTIAKKSVK KGIVKPEESE TDEDDLDLGI SPNATSEKKK ESWRLDGRGK MSSRKYVEKL YPRLAEEIDI DPKCVPLLDY LSTFGLKESH
201: FVQMYERHMP SLQINVFSAQ ERLDYLLSVG VKHRDIKRML LRQPQILQYT VENNLKAHIS FLMGLGIPNS KIGQIVAATP SLFSYSVENS LRPTIRYLIE
301: EVGIKETDVG KVVQLSPQIL VQRLDITWNT RYMFLSKELG APRDSVVKMV KKHPQLLHYS IDDGFLPRIN FLRSIGMCNS DILKVLTSLT QVLSLSLEDN
401: LKPKYMYLVN ELNNEVHILT KYPMYLSLSL DQRIRPRHRF LVELKKVRKG PFPLSSLVPN DESFCQQWAG TSVDTYLAFR QRLLLKEFAN KYDKRG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.