Factsheet for TraesCS2D01G198500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G218100.1	Wheat	plastid	98.94	93.39
TraesCS2A01G189200.1	Wheat	plastid	98.51	92.99
HORVU2Hr1G036490.17	Barley	mitochondrion	95.12	89.07
EER97446	Sorghum	mitochondrion	79.62	74.11
Os07t0583200-01	Rice	endoplasmic reticulum, plastid	78.56	73.56
PGSC0003DMT400076662	Potato	cytosol	41.61	67.12
Zm00001d006700_P003	Maize	mitochondrion, plastid	78.98	64.58
GSMUA_Achr3P29890_001	Banana	plastid	61.15	56.8
KRH73870	Soybean	plastid	54.14	52.04
KRH14270	Soybean	plastid	54.78	51.91
Solyc12g015640.1.1	Tomato	plastid	52.23	51.04
Bra028970.1-P	Field mustard	plastid	51.59	49.39
CDY66686	Canola	extracellular, vacuole	51.59	49.29
CDY36755	Canola	nucleus, vacuole	51.59	49.29
AT5G55580.1	Thale cress	plastid	51.59	48.99
VIT_19s0090g01770.t01	Wine grape	plastid	49.26	46.12
TraesCS5D01G432100.1	Wheat	plastid	14.86	21.41
TraesCS4D01G156100.1	Wheat	mitochondrion	13.38	20.06
TraesCS7D01G248600.1	Wheat	cytosol	12.53	18.97
TraesCS6D01G188800.1	Wheat	plastid	11.25	18.93
TraesCS1D01G252000.1	Wheat	plastid	17.62	16.6
TraesCS6D01G325000.1	Wheat	mitochondrion	16.99	16.29
TraesCS6D01G196900.1	Wheat	plastid	16.14	15.67
TraesCS2D01G255600.1	Wheat	mitochondrion	18.9	14.71
TraesCS5D01G372800.1	Wheat	plastid	16.99	13.68

Protein Annotations

Gene3D:1.25.70.10	MapMan:15.6.2.2	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003690
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139
GO:GO:0006355	GO:GO:0006950	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009507	GO:GO:0009536	GO:GO:0009628	GO:GO:0009651	GO:GO:0009658	GO:GO:0009987
GO:GO:0016043	GO:GO:0048364	GO:GO:0048367	InterPro:IPR038538	InterPro:MTERF	InterPro:MTERF_sf
PFAM:PF02536	PANTHER:PTHR13068	PANTHER:PTHR13068:SF13	SMART:SM00733	EnsemblPlantsGene:TraesCS2D01G198500	EnsemblPlants:TraesCS2D01G198500.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2D:-:147229886..147233616

Molecular Weight (calculated)

54169.3 Da

IEP (calculated)

9.539

GRAVY (calculated)

-0.474

Length

471 amino acids

Sequence
(BLAST)

001: MALLQLHPPP LAALGRSVLR CRPFPSATAR RSLASVAFSL QTNVRLLKPN RRSRRSRYPY YDLDDDEEEE DEEYDEDDES EDDLSGLEYP GVLYTNNPRA
101: PNKRAGRKTQ LVKENWEGRR PKTRDKHASP GRSNSLQPRS KINRTLLNLT SMNSEVELKN ESISRSLFQK LQEEYDFDDK WLPLIDYLCS FGLRESHFTY
201: IYERHMACLQ INRASAEERL EFLLSVGVKS KDLKRMLVRQ PQILEYTLSN LKSHVAFLAG IGVPEARMGQ IISSAPSFLS YSIEQSLKPT ISYLIEEVGI
301: EECDVGKVVQ LSPQILVQRI DNAWKSRFLF LSKELGAPKD SIVKMVTKHP QLLHYSIEEG ILPRINFLRS IGMRNSDILK ILTSLTQVLS LSVEKNLKPK
401: YLYLVNDLKN EAQSLTKYPM YLSLSLEQRI RPRHRFLVSL KKAPKGPFPL SSFVLTDERF CQRLAGTSLE K

Best Arabidopsis Sequence Match ( AT5G55580.1 )
(BLAST)

001: MAGFSLYCFK NPRILFTLPS ESPLFVLGSD KCSPATRRPS RKTRGFVVTY AHSNPKIINP KKKSRYGQTL SPYDSDEDDD DDDDDDDDDW LLNDDFAEVT
101: EYEKKKPKSH KQTIAKKSVK KGIVKPEESE TDEDDLDLGI SPNATSEKKK ESWRLDGRGK MSSRKYVEKL YPRLAEEIDI DPKCVPLLDY LSTFGLKESH
201: FVQMYERHMP SLQINVFSAQ ERLDYLLSVG VKHRDIKRML LRQPQILQYT VENNLKAHIS FLMGLGIPNS KIGQIVAATP SLFSYSVENS LRPTIRYLIE
301: EVGIKETDVG KVVQLSPQIL VQRLDITWNT RYMFLSKELG APRDSVVKMV KKHPQLLHYS IDDGFLPRIN FLRSIGMCNS DILKVLTSLT QVLSLSLEDN
401: LKPKYMYLVN ELNNEVHILT KYPMYLSLSL DQRIRPRHRF LVELKKVRKG PFPLSSLVPN DESFCQQWAG TSVDTYLAFR QRLLLKEFAN KYDKRG

Arabidopsis Description

MTERF9Transcription termination factor MTERF9, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FM80]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.