Factsheet for TraesCS6D01G325000.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G376100.1	Wheat	mitochondrion	98.37	98.37
HORVU6Hr1G082970.1	Barley	cytosol	97.96	91.27
TraesCS6A01G343900.1	Wheat	plastid	98.78	89.81
Os02t0783100-01	Rice	mitochondrion	87.98	89.07
Zm00001d052081_P003	Maize	mitochondrion	87.17	87.53
EES07645	Sorghum	mitochondrion	87.17	87.53
Bra004800.1-P	Field mustard	cytosol	59.27	65.1
VIT_11s0016g02240.t01	Wine grape	mitochondrion	62.73	64.03
GSMUA_Achr10P...	Banana	mitochondrion	47.45	62.8
KRH60420	Soybean	cytosol	52.14	62.75
CDX79786	Canola	mitochondrion	60.9	60.65
Solyc11g017050.1.1	Tomato	extracellular	61.51	60.64
PGSC0003DMT400023814	Potato	mitochondrion	60.69	60.57
KRH41721	Soybean	mitochondrion	61.1	60.12
CDY17890	Canola	mitochondrion	60.49	59.64
AT2G44020.1	Thale cress	mitochondrion	60.9	58.97
TraesCS1D01G252000.1	Wheat	plastid	44.81	44.0
TraesCS5D01G432100.1	Wheat	plastid	14.66	22.02
TraesCS7D01G248600.1	Wheat	cytosol	13.44	21.22
TraesCS6D01G196900.1	Wheat	plastid	18.74	18.97
TraesCS6D01G188800.1	Wheat	plastid	10.79	18.93
TraesCS4D01G156100.1	Wheat	mitochondrion	11.81	18.47
TraesCS2D01G198500.1	Wheat	plastid	16.29	16.99
TraesCS5D01G372800.1	Wheat	plastid	19.55	16.41
TraesCS2D01G255600.1	Wheat	mitochondrion	16.5	13.39

Protein Annotations

Gene3D:1.25.70.10	MapMan:15.6.2.2	MapMan:16.12.2.2.1.5	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003690	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR038538	InterPro:MTERF	InterPro:MTERF_sf	PFAM:PF02536
PANTHER:PTHR13068	PANTHER:PTHR13068:SF8	SMART:SM00733	EnsemblPlantsGene:TraesCS6D01G325000	EnsemblPlants:TraesCS6D01G325000.1	SEG:seg

Description

No Description!

Coordinates

chr6D:-:431273531..431275103

Molecular Weight (calculated)

55048.7 Da

IEP (calculated)

8.687

GRAVY (calculated)

0.043

Length

491 amino acids

Sequence
(BLAST)

001: MLPLARAALR RLGPVTAGDG SLPARLLLLA PLASKPSSST PPEYQMPSVT WGVIQGRRER LVSRVLALDF LRSAGVTDPA GELEAVELPS SLDVLQERLD
101: FLLRLGLSTD DLSAYPFLLA CSLRKNVIPV LSYLEKLGVT RARLAAFVRA YPACLHASVA VDLAPIVKAL RGLDVDRQDI PRVLERYPDV LGLKPDGTIS
201: TSVAYLVGIV GVAPRDIGPM VTHYPFFLSM RVGTTIKPFC DYITSLGLPM RILARIIEKR PYILGYDLEE TVKPNVEALL SFGIRKEVLP LMIAQYPSIL
301: GLPLKVKLAA QQYFFNLKLK IDPDGFARAI EKLPQLVSLH QNVILKPVEF LRGRGITDDD IGRMLIRCPQ ILLLRNELMK NSFYFFKSEL KRPISELLEY
401: PEYFTYSLES RIKPRYMRVA SKGIRCSLDW FLNCSDQRFE ERMRGDFIEG DAPGPSFTMG GKLQMPGNQL VSDDDNEESD DEVLYRRTVM L

Best Arabidopsis Sequence Match ( AT2G44020.1 )
(BLAST)

001: MSYLLRRNKF VALLKRQSLI FPITSTEAKT LINPDPNIPQ FQNPCSIFRI AHYATQSSKF PEYEMPTVTW GVIQGKKEKL VNRVKICDYL KGLGIITDEL
101: ESIELPSTIE VMCERVEFLQ KLGLTIDDIN EYPLMLGCSV RKNLIPVLAY LEKIGISRSK LGEFVKNYPQ VLHASVVVEL APVVKFLRGL DVEKQDLGYV
201: LMKYPELLGF KLEGTMSTSV AYLVSIGVSP RDIGPMVTQY PYLLGMRVGT MIKPLVDYLI SIGLPKKIVA RMLEKRSYIV GYNLEETVKP NVDCLISFGV
301: KKELLPLLIA QYPQILGLPV KAKMSTQQYF FSLKLKIDPE GFARVVEKMP QIVSLKQNVI MKPIEFLLGR AFQVEDIAKM VVRCPQILCS RVELMKNSYY
401: FYKTEMGRPM KELVEYPEYF TYSLESRIKP RYQKLQSKGI RSSLNWFLNC SDQRFEERLQ GNFIDPDTEG PTFDMGGKLE MPGGEIVTDE EEDESDDEVL
501: YRRTLTL

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:O80572]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.