Factsheet for Solyc11g017050.1.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 4
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

extracellular: 29876421

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400023814	Potato	mitochondrion	95.18	96.34
VIT_11s0016g02240.t01	Wine grape	mitochondrion	76.71	79.42
KRH60420	Soybean	cytosol	62.25	75.98
Bra004800.1-P	Field mustard	cytosol	67.07	74.72
KRH41721	Soybean	mitochondrion	74.3	74.15
AT2G44020.1	Thale cress	mitochondrion	71.89	70.61
CDX79786	Canola	mitochondrion	69.68	70.39
CDY17890	Canola	mitochondrion	70.08	70.08
GSMUA_Achr10P...	Banana	mitochondrion	48.39	64.96
Os02t0783100-01	Rice	mitochondrion	61.45	63.09
TraesCS6D01G325000.1	Wheat	mitochondrion	60.64	61.51
Zm00001d052081_P003	Maize	mitochondrion	59.84	60.94
EES07645	Sorghum	mitochondrion	59.64	60.74
TraesCS6B01G376100.1	Wheat	mitochondrion	59.84	60.69
HORVU6Hr1G082970.1	Barley	cytosol	60.24	56.93
TraesCS6A01G343900.1	Wheat	plastid	60.24	55.56
Solyc04g005630.2.1	Tomato	nucleus	47.39	43.7
Solyc11g044360.1.1	Tomato	cytosol	15.06	23.66
Solyc01g007750.2.1	Tomato	plastid	14.26	22.4
Solyc02g021430.1.1	Tomato	plastid	12.45	20.26
Solyc05g007840.2.1	Tomato	plastid	13.05	19.82
Solyc01g109550.2.1	Tomato	mitochondrion	10.84	18.37
Solyc02g093940.2.1	Tomato	nucleus	17.67	18.18
Solyc03g124040.2.1	Tomato	golgi, plastid	18.47	16.03
Solyc12g015640.1.1	Tomato	plastid	15.06	15.56
Solyc03g081300.2.1	Tomato	plastid	14.86	15.04
Solyc01g109630.2.1	Tomato	mitochondrion	19.68	13.9

Protein Annotations

Gene3D:1.25.70.10	MapMan:15.6.2.2	MapMan:16.12.2.2.1.5	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003690	GO:GO:0003723	GO:GO:0003727	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0008380	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009658	GO:GO:0009987
GO:GO:0016043	GO:GO:0019843	GO:GO:0032502	GO:GO:0042255	InterPro:IPR038538	UniProt:K4D6K9
InterPro:MTERF	InterPro:MTERF_sf	PFAM:PF02536	PANTHER:PTHR13068	PANTHER:PTHR13068:SF8	SMART:SM00733
EnsemblPlantsGene:Solyc11g017050.1	EnsemblPlants:Solyc11g017050.1.1	UniParc:UPI000276A755	SEG:seg	:	:

Description

No Description!

Coordinates

chr11:+:7847836..7849332

Molecular Weight (calculated)

57094.1 Da

IEP (calculated)

8.696

GRAVY (calculated)

-0.146

Length

498 amino acids

Sequence
(BLAST)

001: MTSIIRRNQS LKTIFRNPKD SFFNSTLKPY RTPQAPYRVL NQKPFSTHSS KFPEYEMPTV TWGVVQGRKE KLVSRVIISD YLRSIGVIPD ELEELELPST
101: VEVMRERVEF LQKIGLTVDD MNEYPLMLGC SVRKNIIPVL TYLEKIGLQR SKLGEFIKIY PQCLHTSVVV ELVPVIKFLR GLDVEKQDIG YVLMKYPELL
201: GFKLEGTMST SVAYLVSIGV NPRDVGPMVT QYPYFLGMRV GTTIKPLVDY LVSLGVPKKI LARMLEKRAY LLGYDLEETV KPNVNCLLSF GLKKDTLPSV
301: IAQFPQILGL PLKAKLSSQQ YFFNLKLKID PDGFARVIEK MPQIVSLHQH VIMKPVEFLV GRGFSTADVA KMIVKCPQLV ALQVGLMKNS YYFFKSDMGR
401: PMEELLDFPD YFTYSLESRI KPRYQRLQNK GMRCSLGWFL NCSDQRFEER LYGDYIEPES SGPSFCMGGK LELPGNEIVS EEEDESEDET LYRRTLSL

Best Arabidopsis Sequence Match ( AT2G44020.1 )
(BLAST)

001: MSYLLRRNKF VALLKRQSLI FPITSTEAKT LINPDPNIPQ FQNPCSIFRI AHYATQSSKF PEYEMPTVTW GVIQGKKEKL VNRVKICDYL KGLGIITDEL
101: ESIELPSTIE VMCERVEFLQ KLGLTIDDIN EYPLMLGCSV RKNLIPVLAY LEKIGISRSK LGEFVKNYPQ VLHASVVVEL APVVKFLRGL DVEKQDLGYV
201: LMKYPELLGF KLEGTMSTSV AYLVSIGVSP RDIGPMVTQY PYLLGMRVGT MIKPLVDYLI SIGLPKKIVA RMLEKRSYIV GYNLEETVKP NVDCLISFGV
301: KKELLPLLIA QYPQILGLPV KAKMSTQQYF FSLKLKIDPE GFARVVEKMP QIVSLKQNVI MKPIEFLLGR AFQVEDIAKM VVRCPQILCS RVELMKNSYY
401: FYKTEMGRPM KELVEYPEYF TYSLESRIKP RYQKLQSKGI RSSLNWFLNC SDQRFEERLQ GNFIDPDTEG PTFDMGGKLE MPGGEIVTDE EEDESDDEVL
501: YRRTLTL

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:O80572]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.