Factsheet for Solyc01g007750.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400085903	Potato	plastid	92.74	91.88
VIT_08s0007g02500.t01	Wine grape	plastid	53.94	50.59
KRH43735	Soybean	plastid	49.53	46.45
AT2G36000.1	Thale cress	plastid	48.58	46.25
KRH13722	Soybean	plastid	49.53	46.18
Bra017269.1-P	Field mustard	plastid	45.43	43.5
GSMUA_AchrUn_...	Banana	plastid	46.06	43.32
Solyc02g021430.1.1	Tomato	plastid	34.38	35.62
Os03t0360600-00	Rice	cytosol, mitochondrion	32.18	33.89
Zm00001d029242_P001	Maize	plastid	31.86	33.33
Zm00001d047442_P001	Maize	plastid	30.91	32.89
TraesCS1A01G084300.1	Wheat	mitochondrion	32.49	32.8
TraesCS4D01G156100.1	Wheat	mitochondrion	32.49	32.8
TraesCS4B01G156500.1	Wheat	mitochondrion	32.18	32.48
KXG39318	Sorghum	plastid	31.86	32.27
HORVU4Hr1G045210.1	Barley	plastid	32.81	30.68
Solyc05g007840.2.1	Tomato	plastid	29.97	28.96
Solyc01g109550.2.1	Tomato	mitochondrion	25.87	27.89
Solyc11g044360.1.1	Tomato	cytosol	19.56	19.56
Solyc02g093940.2.1	Tomato	nucleus	25.55	16.74
Solyc12g015640.1.1	Tomato	plastid	22.71	14.94
Solyc11g017050.1.1	Tomato	extracellular	22.4	14.26
Solyc01g109630.2.1	Tomato	mitochondrion	26.81	12.06
Solyc04g005630.2.1	Tomato	nucleus	20.5	12.04
Solyc03g081300.2.1	Tomato	plastid	18.3	11.79
Solyc03g124040.2.1	Tomato	golgi, plastid	21.14	11.67

Protein Annotations

Gene3D:1.25.70.10	MapMan:15.6.2.2	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003690
GO:GO:0003723	GO:GO:0003727	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0008380
GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009658	GO:GO:0009987	GO:GO:0016043
GO:GO:0019843	GO:GO:0032502	GO:GO:0042255	InterPro:IPR038538	UniProt:K4ASX3	InterPro:MTERF
InterPro:MTERF_sf	PFAM:PF02536	PANTHER:PTHR13068	PANTHER:PTHR13068:SF46	SMART:SM00733	EnsemblPlantsGene:Solyc01g007750.2
EnsemblPlants:Solyc01g007750.2.1	UniParc:UPI0002762B09	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr1:+:1911479..1912823

Molecular Weight (calculated)

36041.3 Da

IEP (calculated)

9.155

GRAVY (calculated)

-0.008

Length

317 amino acids

Sequence
(BLAST)

001: MQETLHFSSS SSFSLPKSSI SPPKSFKSST ISYPQHPKPP TLISTTPPTP TPQNFHLQEK LLFLDSLGVD SLHCLSSQPL IVSSSLSDLK SVIDFLYSVN
101: LTILDVRRVL HMCPDILTAG ISTTLRPAVT FLLREALVTG EKLPGVLRRR PRLLTKCVEK NLRPTLYFLQ STIGIEDVSK CATLLSCSVE TKFMPRLDYL
201: QRIGFSRRDA KVMFRRFPSL FCYSIEENLE PKFDYFVVEM GRELKELIVF PQYFSFSLEN RIKPRHKMCV EKGVCLSLPV MLKSHESRFR DRLEVCCSSS
301: MPVAECGVQT ILLSRVY

Best Arabidopsis Sequence Match ( AT2G36000.1 )
(BLAST)

001: MQQEALSFLS SSLPSLHHNF PSLSRLRFNN FPALSFKPNT SSSSSSFFKS PDIPSLSSTT TTTTTTETLE SSIHEKLIYL DSLGIDFLTL INRHPPLLST
101: ALSAVESVVD YMTTPPINFT LQDFRRLVSM CPELLTSPLT SHTIPVITFL LREVGVDSIF DLRQALRRRP RLLACSVDHQ LRPTLYFLQR IGILDPHKHT
201: YLLSCSVDNK LVPRIDYFEK LGFSRRSATA MFKRFPQLFN YSIAENYEPK LKYLMVEMGR DVREVLEFPQ YFSFSLENRI KPRHEACAAK GVRFPLPVML
301: KTNEAGFRDT LEVCCDSSPP LKTSRLVTVQ KDS

Arabidopsis Description

At2g36000/F11F19.9 [Source:UniProtKB/TrEMBL;Acc:Q9SJ50]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.