CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH43735	Soybean	plastid	96.47	97.04
PGSC0003DMT400075363	Potato	cytosol	38.82	63.46
VIT_08s0007g02500.t01	Wine grape	plastid	56.47	56.8
PGSC0003DMT400085903	Potato	plastid	46.76	49.69
Solyc01g007750.2.1	Tomato	plastid	46.18	49.53
AT2G36000.1	Thale cress	plastid	46.47	47.45
GSMUA_AchrUn_...	Banana	plastid	44.41	44.81
Bra017269.1-P	Field mustard	plastid	43.24	44.41
KRH40190	Soybean	cytosol	13.53	41.82
Os03t0360600-00	Rice	cytosol, mitochondrion	32.94	37.21
Zm00001d047442_P001	Maize	plastid	32.06	36.58
KRH12828	Soybean	plastid	31.76	35.76
TraesCS4D01G156100.1	Wheat	mitochondrion	32.65	35.35
TraesCS1A01G084300.1	Wheat	mitochondrion	32.65	35.35
Zm00001d029242_P001	Maize	plastid	31.18	34.98
KXG39318	Sorghum	plastid	32.06	34.82
TraesCS4B01G156500.1	Wheat	mitochondrion	32.06	34.71
KRH74890	Soybean	cytosol, plasma membrane, plastid	26.47	33.96
KRH70749	Soybean	plastid	28.82	33.22
KRH37793	Soybean	plastid	31.18	32.92
HORVU4Hr1G045210.1	Barley	plastid	32.35	32.45
KRH01028	Soybean	plastid	25.0	31.02
KRH32500	Soybean	cytosol	22.65	22.99
KRH19886	Soybean	cytosol	22.65	22.99
KRH14270	Soybean	plastid	23.24	15.9
KRH73870	Soybean	plastid	22.65	15.71
KRH39012	Soybean	cytosol	20.59	15.66
KRH60420	Soybean	cytosol	18.53	15.44
KRG94311	Soybean	plastid	21.47	15.43
KRH57654	Soybean	mitochondrion, plastid	21.47	15.21
KRH41721	Soybean	mitochondrion	21.18	14.43
KRH64303	Soybean	nucleus	20.88	14.26
KRH72610	Soybean	plastid	20.59	13.51
KRH24469	Soybean	plastid	22.06	12.02
KRH09594	Soybean	cytosol	19.12	10.98
KRH29455	Soybean	mitochondrion	16.18	9.68

Protein Annotations

Gene3D:1.25.70.10	EntrezGene:100794678	MapMan:15.6.2.2	EMBL:ACUP02009782	EnsemblPlantsGene:GLYMA_15G259600	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003690	GO:GO:0003723	GO:GO:0003727	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0008380	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536
GO:GO:0009658	GO:GO:0009987	GO:GO:0016043	GO:GO:0019843	GO:GO:0032502	GO:GO:0042255
UniProt:I1MJA9	InterPro:IPR038538	EnsemblPlants:KRH13722	ProteinID:KRH13722	ProteinID:KRH13722.1	ProteinID:KRH13723.1
InterPro:MTERF	InterPro:MTERF_sf	PFAM:PF02536	PANTHER:PTHR13068	PANTHER:PTHR13068:SF46	SMART:SM00733
UniParc:UPI000233BCFF	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr15:-:49206962..49211245

Molecular Weight (calculated)

39175.7 Da

IEP (calculated)

9.398

GRAVY (calculated)

-0.147

Length

340 amino acids

Sequence
(BLAST)

001: MASATATTLF TPNPMFSTEH HSLSPSPTIP KSFTGLCKPF HSRVPTSIPF FHCRRPKFFV RATVIKWRCP KQTIPPNDTG FQKKLLYLES IGIDSFLLIE
101: NHPTVITTSL ADIRSTVEYI TSLDFTAIEF RRMVGMCPEI LTTQVSDLIP VFTFLHREVH VPGSDIKRVI NRRPRLLVSS VSKRLRPTLY FLQSIGIEEV
201: NKHTDLLSCS VEEKFMPRID YFENIGFSRR DATSMFRRFP QLFCYSIKNN LEPKYSYFVV EMGRDLKELK EFPQYFSFSL ENRIKPRHKQ CVEMGVCFPL
301: PALLKTSEVK FQSRLDVCVN SSTPLKTSPL WSAGCDVYDV

Best Arabidopsis Sequence Match ( AT2G36000.1 )
(BLAST)

001: MQQEALSFLS SSLPSLHHNF PSLSRLRFNN FPALSFKPNT SSSSSSFFKS PDIPSLSSTT TTTTTTETLE SSIHEKLIYL DSLGIDFLTL INRHPPLLST
101: ALSAVESVVD YMTTPPINFT LQDFRRLVSM CPELLTSPLT SHTIPVITFL LREVGVDSIF DLRQALRRRP RLLACSVDHQ LRPTLYFLQR IGILDPHKHT
201: YLLSCSVDNK LVPRIDYFEK LGFSRRSATA MFKRFPQLFN YSIAENYEPK LKYLMVEMGR DVREVLEFPQ YFSFSLENRI KPRHEACAAK GVRFPLPVML
301: KTNEAGFRDT LEVCCDSSPP LKTSRLVTVQ KDS

Arabidopsis Description

At2g36000/F11F19.9 [Source:UniProtKB/TrEMBL;Acc:Q9SJ50]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.