CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plasma membrane, plastid

Predictor Summary:

plastid 2
mitochondrion 2
cytosol 1
nucleus 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH70749	Soybean	plastid	90.57	81.36
PGSC0003DMT400047490	Potato	mitochondrion	23.02	64.89
Bra024793.1-P	Field mustard	extracellular	58.11	54.23
CDY45184	Canola	extracellular, mitochondrion	58.11	54.04
AT2G03050.2	Thale cress	cytosol, golgi, mitochondrion, plastid	57.74	53.87
CDY03022	Canola	extracellular	57.36	53.52
VIT_01s0010g03740.t01	Wine grape	plastid	60.0	50.8
PGSC0003DMT400047424	Potato	plastid	57.74	48.11
Solyc05g007840.2.1	Tomato	plastid	57.74	46.65
GSMUA_Achr5P23270_001	Banana	mitochondrion	50.57	43.37
GSMUA_Achr6P02570_001	Banana	plastid	36.98	40.66
KRH40190	Soybean	cytosol	16.23	39.09
KRH12828	Soybean	plastid	40.38	35.43
KRH37793	Soybean	plastid	41.13	33.85
KRH01028	Soybean	plastid	30.94	29.93
KRH43735	Soybean	plastid	33.96	26.63
KRH13722	Soybean	plastid	33.96	26.47
KRH19886	Soybean	cytosol	22.26	17.61
KRH32500	Soybean	cytosol	22.26	17.61
KRH39012	Soybean	cytosol	26.79	15.88
KRG94311	Soybean	plastid	27.55	15.43
KRH57654	Soybean	mitochondrion, plastid	27.92	15.42
KRH60420	Soybean	cytosol	21.51	13.97
KRH73870	Soybean	plastid	25.28	13.67
KRH14270	Soybean	plastid	25.28	13.48
KRH41721	Soybean	mitochondrion	24.91	13.23
KRH64303	Soybean	nucleus	23.4	12.45
KRH72610	Soybean	plastid	22.64	11.58
KRH09594	Soybean	cytosol	25.66	11.49
KRH24469	Soybean	plastid	24.91	10.58
KRH29455	Soybean	mitochondrion	17.74	8.27

Protein Annotations

Gene3D:1.25.70.10	MapMan:15.6.2.2	EMBL:ACUP02000084	EnsemblPlantsGene:GLYMA_01G049900	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003690	GO:GO:0003723	GO:GO:0003727	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0008380	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009658
GO:GO:0009987	GO:GO:0016043	GO:GO:0019843	GO:GO:0032502	GO:GO:0042255	UniProt:I1J5S4
InterPro:IPR038538	EnsemblPlants:KRH74890	ProteinID:KRH74890	ProteinID:KRH74890.1	InterPro:MTERF	InterPro:MTERF_sf
PFAM:PF02536	PANTHER:PTHR13068	PANTHER:PTHR13068:SF36	SMART:SM00733	UniParc:UPI0002969011	:

Description

hypothetical protein

Coordinates

chr1:-:5863028..5863825

Molecular Weight (calculated)

30112.1 Da

IEP (calculated)

10.300

GRAVY (calculated)

0.023

Length

265 amino acids

Sequence
(BLAST)

001: PQFSRHPTTT SDRGLVFHEK VLYLKALKVN PNKAFRLNPT LRSSPLSTLK SVTRSLSSLG IPRAAMGRIL DMLPVLLTCD PYLQFYPLLD FLLHEVPILY
101: PDVHLSILRS PRLLVCSVNN QLRPTLCFLR ELGFSGPHSL TCQTTLLLVS NVEDTLLPKI EFLKGLGFTH EEVANMVVRS PGLLTFSVEK NLGPKVEFFL
201: REMNGDVAEL KRFPQYFSFS LERRIKPRFG MLRRVGVSMN LEDMLKVSDG GFNARLVDST SRFFR

Best Arabidopsis Sequence Match ( AT2G03050.1 )
(BLAST)

001: MIARCSLFPP PCFSAVRIRC FAGETSDTGI LFREKLIYLQ DLNVDPHKAL RVNPSLRSAP ISSVVSVETL LSSTGLSRPA VGRILDMFPD LLTSDPESEI
101: LPVLRFLSNE ISISEQDIPK SISRCPRLLI SSVDYQLRPA LTFLKTLGFV GRDTITSRNT VLLVSNVERT LIPKIEYLEE GLGFTREEVA KMVVRSPALL
201: TYSVDNNLVP KVEFFIEEMR GDVKELKRFP QYFSFSLERK IKPRHRLLKE HGILMPLSEM LKVSDGQFNH WLLELRLRSA ERR

Arabidopsis Description

MTERF1SOLDAT10 [Source:UniProtKB/TrEMBL;Acc:A0A178VYV9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.