Factsheet for Bra024793.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 3
mitochondrion 3
cytosol 1
plasma membrane 2
extracellular 2
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane, plastid
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45184	Canola	extracellular, mitochondrion	100.0	99.65
AT2G03050.2	Thale cress	cytosol, golgi, mitochondrion, plastid	89.79	89.79
PGSC0003DMT400047490	Potato	mitochondrion	23.24	70.21
KRH74890	Soybean	cytosol, plasma membrane, plastid	54.23	58.11
KRH70749	Soybean	plastid	54.93	52.88
VIT_01s0010g03740.t01	Wine grape	plastid	57.39	52.08
PGSC0003DMT400047424	Potato	plastid	54.93	49.06
GSMUA_Achr5P23270_001	Banana	mitochondrion	52.11	47.9
Solyc05g007840.2.1	Tomato	plastid	53.87	46.65
GSMUA_Achr6P02570_001	Banana	plastid	34.86	41.08
Bra022367.1-P	Field mustard	plastid	32.04	33.09
Bra017269.1-P	Field mustard	plastid	38.38	32.93
Bra012812.1-P	Field mustard	cytosol	22.18	18.81
Bra036876.1-P	Field mustard	cytosol	27.46	15.82
Bra004800.1-P	Field mustard	cytosol	23.24	14.77
Bra028970.1-P	Field mustard	plastid	24.65	14.23
Bra003005.1-P	Field mustard	plastid	24.3	13.83
Bra031213.1-P	Field mustard	plastid	24.3	11.0
Bra036228.1-P	Field mustard	golgi, mitochondrion, plastid	20.07	10.73

Protein Annotations

Gene3D:1.25.70.10	MapMan:15.6.2.2	EnsemblPlantsGene:Bra024793	EnsemblPlants:Bra024793.1	EnsemblPlants:Bra024793.1-P	GO:GO:0000003
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003690	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006355	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009658
GO:GO:0009790	GO:GO:0009791	GO:GO:0009793	GO:GO:0009987	GO:GO:0016043	InterPro:IPR038538
UniProt:M4E7N7	InterPro:MTERF	InterPro:MTERF_sf	PFAM:PF02536	PANTHER:PTHR13068	PANTHER:PTHR13068:SF36
SMART:SM00733	UniParc:UPI000253F869	SEG:seg	:	:	:

Description

AT2G03050 (E=7e-130) | mitochondrial transcription termination factor-related / mTERF-related

Coordinates

chrA06:+:23470277..23471131

Molecular Weight (calculated)

32327.7 Da

IEP (calculated)

8.626

GRAVY (calculated)

0.031

Length

284 amino acids

Sequence
(BLAST)

001: MFARCCLLPP PFISAVRTRC FAGETSDTGL LFREKLIYLQ DLNVDPHKAL RVNPSLRAAP ISTVVSVETL LSSTGLSRPA VGRILDMFPD LLTSDPESDI
101: LPVLRFLSDE IYLSDEDIPK SITRCPRLLI SSVDFQLRPA LAFLKTLGFV GRDTVTSRNT VLLVSSVERT LIPKIEFLEE GLGFTRDEVA KMVVRSPALL
201: TYSVENNLAP KVEFFMEEMR GDVKELKRFP QYFSFSLERK IKPRHRLLKE HGILMPLSEM LKVSDGQFNL WLVELRLRSV ERRL

Best Arabidopsis Sequence Match ( AT2G03050.2 )
(BLAST)

001: MMIARCSLFP PPCFSAVRIR CFAGETSDTG ILFREKLIYL QDLNVDPHKA LRVNPSLRSA PISSVVSVET LLSSTGLSRP AVGRILDMFP DLLTSDPESE
101: ILPVLRFLSN EISISEQDIP KSISRCPRLL ISSVDYQLRP ALTFLKTLGF VGRDTITSRN TVLLVSNVER TLIPKIEYLE EGLGFTREEV AKMVVRSPAL
201: LTYSVDNNLV PKVEFFIEEM RGDVKELKRF PQYFSFSLER KIKPRHRLLK EHGILMPLSE MLKVSDGQFN HWLLELRLRS AERR

Arabidopsis Description

MTERF1SOLDAT10 [Source:UniProtKB/TrEMBL;Acc:A0A178VYV9]
SUBAcon: [mitochondrion,golgi,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.