Factsheet for GSMUA_Achr5P23270_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
cytosol 2
nucleus 1
mitochondrion 2
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400047490	Potato	mitochondrion	21.36	70.21
GSMUA_Achr6P02570_001	Banana	plastid	46.6	59.75
CDY03022	Canola	extracellular	48.22	52.46
Bra024793.1-P	Field mustard	extracellular	47.9	52.11
CDY45184	Canola	extracellular, mitochondrion	47.9	51.93
AT2G03050.2	Thale cress	cytosol, golgi, mitochondrion, plastid	46.6	50.7
KRH74890	Soybean	cytosol, plasma membrane, plastid	43.37	50.57
VIT_01s0010g03740.t01	Wine grape	plastid	51.13	50.48
PGSC0003DMT400047424	Potato	plastid	51.46	50.0
Solyc05g007840.2.1	Tomato	plastid	50.49	47.56
KRH70749	Soybean	plastid	44.98	47.12
GSMUA_Achr6P31220_001	Banana	plastid	29.45	40.44
GSMUA_AchrUn_...	Banana	plastid	35.6	32.64
GSMUA_Achr2P08550_001	Banana	plastid	27.83	31.39
GSMUA_AchrUn_...	Banana	cytosol	19.42	18.13
GSMUA_Achr3P29890_001	Banana	plastid	24.6	14.99
GSMUA_Achr10P...	Banana	mitochondrion	16.83	14.02
GSMUA_Achr3P02690_001	Banana	plastid	23.3	13.9
GSMUA_Achr7P20690_001	Banana	cytosol	9.39	13.12
GSMUA_Achr3P27780_001	Banana	plastid	23.95	12.13
GSMUA_Achr4P23060_001	Banana	mitochondrion	23.3	10.32
GSMUA_Achr3P24870_001	Banana	cytosol, mitochondrion, plastid	11.65	9.23

Protein Annotations

Gene3D:1.25.70.10	MapMan:15.6.2.2	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003690
GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr5G23270_001	EnsemblPlants:GSMUA_Achr5P23270_001	EnsemblPlants:GSMUA_Achr5T23270_001	InterPro:IPR038538	UniProt:M0T102
InterPro:MTERF	InterPro:MTERF_sf	PFAM:PF02536	PANTHER:PTHR13068	PANTHER:PTHR13068:SF36	SMART:SM00733
UniParc:UPI000295CA1B	SEG:seg	:	:	:	:

Description

Putative mTERF domain containing protein, identical [Source:GMGC_GENE;Acc:GSMUA_Achr5G23270_001]

Coordinates

chr5:+:25049219..25050148

Molecular Weight (calculated)

34598.9 Da

IEP (calculated)

10.975

GRAVY (calculated)

0.062

Length

309 amino acids

Sequence
(BLAST)

001: MLLHFHLSPP PLPPRRPKLL ACSPDPVIRT TGFGPLRPLP PTLLASPAFA TDAGLRFREK LLYLEHDLGL DSSRALSLNP SLRSAPLSAL HSSAAALRSF
101: GLLTADAARV FAMYPSLLTC DPSADLLPVF HFLLGPAAIP FPDLRKAVAR CPRLLVSSVP SQLLPALRFL RRLGFVGRRR ITCRTTLLLV SSIEATLLPK
201: LDYLRRLGFS HQETRSLVLR SPGMLTFSIE NNFKPKVEFF LHDMGRDLSE LKDFPQYFSF SLEGKIKPRH RLLAESRLRM PLSEMLKVSD GEFMSRLVEM
301: RLSPVNDKL

Best Arabidopsis Sequence Match ( AT2G03050.2 )
(BLAST)

001: MMIARCSLFP PPCFSAVRIR CFAGETSDTG ILFREKLIYL QDLNVDPHKA LRVNPSLRSA PISSVVSVET LLSSTGLSRP AVGRILDMFP DLLTSDPESE
101: ILPVLRFLSN EISISEQDIP KSISRCPRLL ISSVDYQLRP ALTFLKTLGF VGRDTITSRN TVLLVSNVER TLIPKIEYLE EGLGFTREEV AKMVVRSPAL
201: LTYSVDNNLV PKVEFFIEEM RGDVKELKRF PQYFSFSLER KIKPRHRLLK EHGILMPLSE MLKVSDGQFN HWLLELRLRS AERR

Arabidopsis Description

MTERF1SOLDAT10 [Source:UniProtKB/TrEMBL;Acc:A0A178VYV9]
SUBAcon: [mitochondrion,golgi,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.