Factsheet for GSMUA_Achr3P29890_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400076662	Potato	cytosol	45.36	78.77
TraesCS2D01G198500.1	Wheat	plastid	56.8	61.15
EER97446	Sorghum	mitochondrion	60.16	60.28
HORVU2Hr1G036490.17	Barley	mitochondrion	59.76	60.24
TraesCS2B01G218100.1	Wheat	plastid	59.17	60.12
Os07t0583200-01	Rice	endoplasmic reticulum, plastid	59.37	59.84
KRH73870	Soybean	plastid	57.59	59.59
KRH14270	Soybean	plastid	58.38	59.56
Solyc12g015640.1.1	Tomato	plastid	56.61	59.54
TraesCS2A01G189200.1	Wheat	plastid	58.38	59.32
CDY36755	Canola	nucleus, vacuole	55.42	57.0
CDY66686	Canola	extracellular, vacuole	55.42	57.0
Bra028970.1-P	Field mustard	plastid	55.23	56.91
AT5G55580.1	Thale cress	plastid	55.62	56.85
VIT_19s0090g01770.t01	Wine grape	plastid	53.06	53.48
Zm00001d006700_P003	Maize	mitochondrion, plastid	59.37	52.26
GSMUA_Achr2P08550_001	Banana	plastid	13.61	25.18
GSMUA_Achr6P31220_001	Banana	plastid	11.05	24.89
GSMUA_Achr5P23270_001	Banana	mitochondrion	14.99	24.6
GSMUA_AchrUn_...	Banana	plastid	16.17	24.33
GSMUA_Achr7P20690_001	Banana	cytosol	8.48	19.46
GSMUA_AchrUn_...	Banana	cytosol	12.62	19.34
GSMUA_Achr6P02570_001	Banana	plastid	8.88	18.67
GSMUA_Achr3P02690_001	Banana	plastid	16.17	15.83
GSMUA_Achr10P...	Banana	mitochondrion	10.45	14.29
GSMUA_Achr3P27780_001	Banana	plastid	16.57	13.77
GSMUA_Achr4P23060_001	Banana	mitochondrion	17.16	12.46
GSMUA_Achr3P24870_001	Banana	cytosol, mitochondrion, plastid	9.27	12.05

Protein Annotations

Gene3D:1.25.70.10	MapMan:15.6.2.2	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003690	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006139	GO:GO:0006355	GO:GO:0006950	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009628	GO:GO:0009651	GO:GO:0009658
GO:GO:0009987	GO:GO:0016043	GO:GO:0048364	GO:GO:0048367	EnsemblPlantsGene:GSMUA_Achr3G29890_001	EnsemblPlants:GSMUA_Achr3P29890_001
EnsemblPlants:GSMUA_Achr3T29890_001	InterPro:IPR038538	UniProt:M0SJ05	InterPro:MTERF	InterPro:MTERF_sf	PFAM:PF02536
PANTHER:PTHR13068	PANTHER:PTHR13068:SF13	SMART:SM00733	UniParc:UPI0002962FE6	SEG:seg	:

Description

mTERF family protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G29890_001]

Coordinates

chr3:-:28843453..28849080

Molecular Weight (calculated)

58081.6 Da

IEP (calculated)

9.348

GRAVY (calculated)

-0.460

Length

507 amino acids

Sequence
(BLAST)

001: MLCFPPKSSP LFFSASSSPL LPSPSAGFRR SGVGFAVFSS HSNPRILKST RRSRTGRLIS PYDDEDNDKD VDEEEDEDES EEGEDDLSDV EDQFSDRKLS
101: KIYSTEPNRK PGQHQVLRKG RQNRLLESAQ SFRLSNGSLK VDGEIISKKI DHQYNLGRSY EMEHVDLENA KQKNSNFAKS KFQKLAEEID FDEKWFPLIE
201: YLSTFGLKDS HLISIYERHM PCLQINLSSA QERLEFLLSV GVKHKDIKRI LMRQPQILEY TVENNLKSHV AFLVSIGVPH SRIGQIITAA PSLFSYSIEH
301: SLKPTVRYLV EEVGIKTSDI SKVVQLSPQV LVQRIDNSWT SRFSFLSKEL GAPKDSIVKM VTKHPQLLHY SIEDGILPRI NFLRSIGMCN SDILKVLTSL
401: AQVLSLSLER NLKPKYLYLV NELRNEVKSL TKYPMYLSLS LEQRIRPRHR FLVSLKKAPK GPFPLSSLVP SDECFCQQWA GTSLEKYLAF RQSLQLTDFA
501: KKYQRKV

Best Arabidopsis Sequence Match ( AT5G55580.1 )
(BLAST)

001: MAGFSLYCFK NPRILFTLPS ESPLFVLGSD KCSPATRRPS RKTRGFVVTY AHSNPKIINP KKKSRYGQTL SPYDSDEDDD DDDDDDDDDW LLNDDFAEVT
101: EYEKKKPKSH KQTIAKKSVK KGIVKPEESE TDEDDLDLGI SPNATSEKKK ESWRLDGRGK MSSRKYVEKL YPRLAEEIDI DPKCVPLLDY LSTFGLKESH
201: FVQMYERHMP SLQINVFSAQ ERLDYLLSVG VKHRDIKRML LRQPQILQYT VENNLKAHIS FLMGLGIPNS KIGQIVAATP SLFSYSVENS LRPTIRYLIE
301: EVGIKETDVG KVVQLSPQIL VQRLDITWNT RYMFLSKELG APRDSVVKMV KKHPQLLHYS IDDGFLPRIN FLRSIGMCNS DILKVLTSLT QVLSLSLEDN
401: LKPKYMYLVN ELNNEVHILT KYPMYLSLSL DQRIRPRHRF LVELKKVRKG PFPLSSLVPN DESFCQQWAG TSVDTYLAFR QRLLLKEFAN KYDKRG

Arabidopsis Description

MTERF9Transcription termination factor MTERF9, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FM80]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.