Factsheet for GSMUA_Achr6P02570_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P23270_001	Banana	mitochondrion	59.75	46.6
KRH74890	Soybean	cytosol, plasma membrane, plastid	40.66	36.98
AT2G03050.2	Thale cress	cytosol, golgi, mitochondrion, plastid	42.74	36.27
KRH70749	Soybean	plastid	43.15	35.25
CDY45184	Canola	extracellular, mitochondrion	41.49	35.09
Bra024793.1-P	Field mustard	extracellular	41.08	34.86
CDY03022	Canola	extracellular	41.08	34.86
VIT_01s0010g03740.t01	Wine grape	plastid	44.81	34.5
PGSC0003DMT400047424	Potato	plastid	41.49	31.45
PGSC0003DMT400047490	Potato	mitochondrion	12.03	30.85
Solyc05g007840.2.1	Tomato	plastid	41.49	30.49
GSMUA_Achr6P31220_001	Banana	plastid	25.31	27.11
GSMUA_AchrUn_...	Banana	plastid	37.34	26.71
GSMUA_Achr2P08550_001	Banana	plastid	30.29	26.64
GSMUA_AchrUn_...	Banana	cytosol	19.09	13.9
GSMUA_Achr3P02690_001	Banana	plastid	19.5	9.07
GSMUA_Achr3P29890_001	Banana	plastid	18.67	8.88
GSMUA_Achr10P...	Banana	mitochondrion	12.86	8.36
GSMUA_Achr3P27780_001	Banana	plastid	18.67	7.38
GSMUA_Achr3P24870_001	Banana	cytosol, mitochondrion, plastid	11.2	6.92
GSMUA_Achr4P23060_001	Banana	mitochondrion	18.67	6.45
GSMUA_Achr7P20690_001	Banana	cytosol	5.39	5.88

Protein Annotations

Gene3D:1.25.70.10	MapMan:15.6.2.2	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003690
GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr6G02570_001	EnsemblPlants:GSMUA_Achr6P02570_001	EnsemblPlants:GSMUA_Achr6T02570_001	InterPro:IPR038538	UniProt:M0T3K5
InterPro:MTERF	InterPro:MTERF_sf	PFAM:PF02536	PANTHER:PTHR13068	PANTHER:PTHR13068:SF36	SMART:SM00733
UniParc:UPI0002954F44	SEG:seg	:	:	:	:

Description

Putative mTERF domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G02570_001]

Coordinates

chr6:+:1676765..1677490

Molecular Weight (calculated)

26419.8 Da

IEP (calculated)

10.147

GRAVY (calculated)

-0.169

Length

241 amino acids

Sequence
(BLAST)

001: MLRSSSSSSS QATYLQPYPP QFRLRHTHDR VRSSSSSPAC PSCLPGLRFR EKLLYLENDL GVDSSRASAS ALALNPSLRS APPSALRASA DSLHSFGLVP
101: PTSPASSPWT PPCSPATPAP TPVPVFRFLL GPVAIPLPDL RKAVGRCPRL LVSSVSDELR PALHFLRRRT TLLLVSSVED ALLPKLDYLR GLGFSHEETR
201: SMVLRSPGLL TFSIENNFRP KVEFLIHDMG RDLAELKDFP Q

Best Arabidopsis Sequence Match ( AT2G03050.1 )
(BLAST)

001: MIARCSLFPP PCFSAVRIRC FAGETSDTGI LFREKLIYLQ DLNVDPHKAL RVNPSLRSAP ISSVVSVETL LSSTGLSRPA VGRILDMFPD LLTSDPESEI
101: LPVLRFLSNE ISISEQDIPK SISRCPRLLI SSVDYQLRPA LTFLKTLGFV GRDTITSRNT VLLVSNVERT LIPKIEYLEE GLGFTREEVA KMVVRSPALL
201: TYSVDNNLVP KVEFFIEEMR GDVKELKRFP QYFSFSLERK IKPRHRLLKE HGILMPLSEM LKVSDGQFNH WLLELRLRSA ERR

Arabidopsis Description

MTERF1SOLDAT10 [Source:UniProtKB/TrEMBL;Acc:A0A178VYV9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.