Factsheet for GSMUA_AchrUn_randomP28740_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 3
nucleus 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400075363	Potato	cytosol	34.12	55.29
VIT_08s0007g02500.t01	Wine grape	plastid	49.26	49.11
PGSC0003DMT400085903	Potato	plastid	45.1	47.5
Solyc01g007750.2.1	Tomato	plastid	43.32	46.06
KRH13722	Soybean	plastid	44.81	44.41
KRH43735	Soybean	plastid	43.92	43.79
Os03t0360600-00	Rice	cytosol, mitochondrion	38.58	43.19
Zm00001d029242_P001	Maize	plastid	38.28	42.57
Zm00001d047442_P001	Maize	plastid	37.09	41.95
KXG39318	Sorghum	plastid	38.28	41.21
TraesCS1A01G084300.1	Wheat	mitochondrion	37.69	40.45
Bra017269.1-P	Field mustard	plastid	39.47	40.18
TraesCS4D01G156100.1	Wheat	mitochondrion	37.39	40.13
AT2G36000.1	Thale cress	plastid	39.17	39.64
TraesCS4B01G156500.1	Wheat	mitochondrion	36.8	39.49
GSMUA_Achr6P02570_001	Banana	plastid	26.71	37.34
HORVU4Hr1G045210.1	Barley	plastid	37.39	37.17
GSMUA_Achr5P23270_001	Banana	mitochondrion	32.64	35.6
GSMUA_Achr2P08550_001	Banana	plastid	26.71	32.85
GSMUA_Achr6P31220_001	Banana	plastid	20.18	30.22
GSMUA_AchrUn_...	Banana	cytosol	17.8	18.13
GSMUA_Achr3P29890_001	Banana	plastid	24.33	16.17
GSMUA_Achr3P02690_001	Banana	plastid	21.96	14.29
GSMUA_Achr10P...	Banana	mitochondrion	15.13	13.75
GSMUA_Achr7P20690_001	Banana	cytosol	7.72	11.76
GSMUA_Achr3P27780_001	Banana	plastid	21.07	11.64
GSMUA_Achr4P23060_001	Banana	mitochondrion	22.26	10.74
GSMUA_Achr3P24870_001	Banana	cytosol, mitochondrion, plastid	10.98	9.49

Protein Annotations

Gene3D:1.25.70.10	MapMan:15.6.2.2	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003690
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536
GO:GO:0009987	EnsemblPlantsGene:GSMUA_AchrUn_randomG28740_001	EnsemblPlants:GSMUA_AchrUn_randomP28740_001	EnsemblPlants:GSMUA_AchrUn_randomT28740_001	InterPro:IPR038538	UniProt:M0UD82
InterPro:MTERF	InterPro:MTERF_sf	PFAM:PF02536	PANTHER:PTHR13068	PANTHER:PTHR13068:SF46	SMART:SM00733
UniParc:UPI000295E06B	SEG:seg	:	:	:	:

Description

Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG28740_001]

Coordinates

chrchrUn_random:-:139371717..139372730

Molecular Weight (calculated)

37655.0 Da

IEP (calculated)

10.467

GRAVY (calculated)

-0.049

Length

337 amino acids

Sequence
(BLAST)

001: MEEVFPFCSY RGLRQVPQIP TTLLSRNAPV QPRLPLLSSP RAARLSLHTP IPLPEKPPKL SPTLPLLPPD SAPSSSSSFR DKLLFLDALG VDLFAAAAAH
101: PALVAVPLAD LRVAVDFLRS LGLAAPEIRR ACGMCPEILT AAPADLAAAV AFLLREAGVQ GRDLRRVIGR RPRLLVSDVA RRLRPTLYFL QMLGVAPIAR
201: HASLLSCSVE EKLLPRLDFL EEVGFSYRDA RAMARRFPQL FCYSIEENLR PKSQFFVSEM RRELRELRDF PQYFSFSLAD RIRPRHQSCK EKGASFPLPA
301: LLRPSNEQFN AQLEVRISSS SPLRRSPLWL ATSDTDL

Best Arabidopsis Sequence Match ( AT2G36000.1 )
(BLAST)

001: MQQEALSFLS SSLPSLHHNF PSLSRLRFNN FPALSFKPNT SSSSSSFFKS PDIPSLSSTT TTTTTTETLE SSIHEKLIYL DSLGIDFLTL INRHPPLLST
101: ALSAVESVVD YMTTPPINFT LQDFRRLVSM CPELLTSPLT SHTIPVITFL LREVGVDSIF DLRQALRRRP RLLACSVDHQ LRPTLYFLQR IGILDPHKHT
201: YLLSCSVDNK LVPRIDYFEK LGFSRRSATA MFKRFPQLFN YSIAENYEPK LKYLMVEMGR DVREVLEFPQ YFSFSLENRI KPRHEACAAK GVRFPLPVML
301: KTNEAGFRDT LEVCCDSSPP LKTSRLVTVQ KDS

Arabidopsis Description

At2g36000/F11F19.9 [Source:UniProtKB/TrEMBL;Acc:Q9SJ50]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.