CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH13722	Soybean	plastid	97.04	96.47
PGSC0003DMT400075363	Potato	cytosol	38.46	62.5
VIT_08s0007g02500.t01	Wine grape	plastid	56.51	56.51
Solyc01g007750.2.1	Tomato	plastid	46.45	49.53
PGSC0003DMT400085903	Potato	plastid	46.45	49.06
AT2G36000.1	Thale cress	plastid	46.45	47.15
Bra017269.1-P	Field mustard	plastid	43.49	44.41
GSMUA_AchrUn_...	Banana	plastid	43.79	43.92
KRH40190	Soybean	cytosol	13.61	41.82
Zm00001d047442_P001	Maize	plastid	32.25	36.58
Os03t0360600-00	Rice	cytosol, mitochondrion	32.25	36.21
KRH12828	Soybean	plastid	31.07	34.77
TraesCS1A01G084300.1	Wheat	mitochondrion	32.25	34.71
TraesCS4D01G156100.1	Wheat	mitochondrion	32.25	34.71
TraesCS4B01G156500.1	Wheat	mitochondrion	31.66	34.08
Zm00001d029242_P001	Maize	plastid	30.47	33.99
KRH74890	Soybean	cytosol, plasma membrane, plastid	26.63	33.96
KXG39318	Sorghum	plastid	31.36	33.87
KRH70749	Soybean	plastid	28.4	32.54
KRH37793	Soybean	plastid	30.47	31.99
HORVU4Hr1G045210.1	Barley	plastid	31.95	31.86
KRH01028	Soybean	plastid	24.56	30.29
KRH32500	Soybean	cytosol	23.37	23.58
KRH19886	Soybean	cytosol	23.37	23.58
KRH14270	Soybean	plastid	23.37	15.9
KRH39012	Soybean	cytosol	21.01	15.88
KRG94311	Soybean	plastid	22.19	15.86
KRH73870	Soybean	plastid	22.78	15.71
KRH57654	Soybean	mitochondrion, plastid	21.89	15.42
KRH60420	Soybean	cytosol	18.34	15.2
KRH64303	Soybean	nucleus	21.01	14.26
KRH41721	Soybean	mitochondrion	20.71	14.03
KRH72610	Soybean	plastid	20.12	13.13
KRH24469	Soybean	plastid	22.19	12.02
KRH09594	Soybean	cytosol	19.53	11.15
KRH29455	Soybean	mitochondrion	16.27	9.68

Protein Annotations

Gene3D:1.25.70.10	EntrezGene:100804440	MapMan:15.6.2.2	EMBL:ACUP02004886	EnsemblPlantsGene:GLYMA_08G167900	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003690	GO:GO:0003723	GO:GO:0003727	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0008380	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536
GO:GO:0009658	GO:GO:0009987	GO:GO:0016043	GO:GO:0019843	GO:GO:0032502	GO:GO:0042255
UniProt:I1KU00	InterPro:IPR038538	EnsemblPlants:KRH43735	ProteinID:KRH43735	ProteinID:KRH43735.1	InterPro:MTERF
InterPro:MTERF_sf	PFAM:PF02536	PANTHER:PTHR13068	PANTHER:PTHR13068:SF46	SMART:SM00733	UniParc:UPI0002338E3D

Description

hypothetical protein

Coordinates

chr8:+:13231077..13235385

Molecular Weight (calculated)

38915.3 Da

IEP (calculated)

8.997

GRAVY (calculated)

-0.162

Length

338 amino acids

Sequence
(BLAST)

001: MASATTLFTP NPMFSTEHHS LSPSPTIPKS FTGLCKPFHS RVPTSIPSFH CRRPKFFVRA TVIKWRCPKQ TIPPDDTGFQ KKLLYLESIG IDSFSLIENH
101: PTVITTSLAD IKSTVEYITS LDFTAIEFRR MVGMCPDILT TQVSDLIPVF TFLHREVHVP GSHIKRVINR RPRLLVCSVS KRLRPTLYFL QSIGIEEVNK
201: HTDLLSCSVE EKFMPRIDYF ENIGFSRRDA TSMFRRFPQL FCYSIKNNLE PKYSYFVVEM GRDLKELKEF PQYFSFSLEN RIEPRHKQCV EMGVCFPLPA
301: LLKTSEVKFQ SRLDVCVNSS TPLKTSPLWS AGCDVYDV

Best Arabidopsis Sequence Match ( AT2G36000.1 )
(BLAST)

001: MQQEALSFLS SSLPSLHHNF PSLSRLRFNN FPALSFKPNT SSSSSSFFKS PDIPSLSSTT TTTTTTETLE SSIHEKLIYL DSLGIDFLTL INRHPPLLST
101: ALSAVESVVD YMTTPPINFT LQDFRRLVSM CPELLTSPLT SHTIPVITFL LREVGVDSIF DLRQALRRRP RLLACSVDHQ LRPTLYFLQR IGILDPHKHT
201: YLLSCSVDNK LVPRIDYFEK LGFSRRSATA MFKRFPQLFN YSIAENYEPK LKYLMVEMGR DVREVLEFPQ YFSFSLENRI KPRHEACAAK GVRFPLPVML
301: KTNEAGFRDT LEVCCDSSPP LKTSRLVTVQ KDS

Arabidopsis Description

At2g36000/F11F19.9 [Source:UniProtKB/TrEMBL;Acc:Q9SJ50]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.