CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029242_P001	Maize	plastid	87.22	90.1
Zm00001d047442_P001	Maize	plastid	83.71	87.92
Os03t0360600-00	Rice	cytosol, mitochondrion	76.68	79.73
TraesCS4D01G156100.1	Wheat	mitochondrion	73.48	73.25
TraesCS4B01G156500.1	Wheat	mitochondrion	72.52	72.29
TraesCS1A01G084300.1	Wheat	mitochondrion	72.2	71.97
HORVU4Hr1G045210.1	Barley	plastid	71.89	66.37
PGSC0003DMT400075363	Potato	cytosol	29.39	44.23
GSMUA_AchrUn_...	Banana	plastid	41.21	38.28
Bra017269.1-P	Field mustard	plastid	37.38	35.35
AT2G36000.1	Thale cress	plastid	37.06	34.83
PGSC0003DMT400085903	Potato	plastid	34.19	33.44
VIT_08s0007g02500.t01	Wine grape	plastid	36.1	33.43
KRH13722	Soybean	plastid	34.82	32.06
Solyc01g007750.2.1	Tomato	plastid	32.27	31.86
KRH43735	Soybean	plastid	33.87	31.36
OQU90879	Sorghum	plastid	28.75	28.21
OQU85198	Sorghum	mitochondrion, plastid	18.21	20.43
EES14251	Sorghum	cytosol	16.29	15.27
KXG30576	Sorghum	cytosol	23.96	15.24
OQU77962	Sorghum	plastid	23.32	14.66
EER97446	Sorghum	mitochondrion	21.41	13.24
EES07645	Sorghum	mitochondrion	18.85	12.07
OQU88410	Sorghum	plastid	23.0	11.96
OQU89932	Sorghum	plastid	21.73	11.17

Protein Annotations

Gene3D:1.25.70.10	MapMan:15.6.2.2	UniProt:A0A1B6QN17	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003690	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507
GO:GO:0009536	GO:GO:0009987	InterPro:IPR038538	EnsemblPlants:KXG39318	ProteinID:KXG39318	ProteinID:KXG39318.1
InterPro:MTERF	InterPro:MTERF_sf	PFAM:PF02536	PANTHER:PTHR13068	PANTHER:PTHR13068:SF47	SMART:SM00733
EnsemblPlantsGene:SORBI_3001G364100	UniParc:UPI00081AD198	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:65322668..65323609

Molecular Weight (calculated)

33523.2 Da

IEP (calculated)

11.057

GRAVY (calculated)

0.075

Length

313 amino acids

Sequence
(BLAST)

001: MAGTRTALAL LGHDGLDSGP RPVPVVAPRR SSSSRLRVVA VALRTRPTTR LAVPGPPLPP APAPEPVLLP SPPVAAGAAA VLLEAGVPPA DLRRAAGMCP
101: ELLSVPAEAI EAALRFLTEE AGVPAPDLPR VLRRRPRLLV SPVAARLRPT LYFLRALGVP DLHRRADLLS FSVEGKLLPR IEFLESLGLP PRAARSMARR
201: FPALFAYAVD GNMRPKAEYL LGAMARRADE LVDFPEYFSY ALATRIVPRH EACAASGVGK LPLPAMLRPG DAKFRATLAS CVGSMLPRRR SPLWHATWVD
301: DDDATAAAKE TMV

Best Arabidopsis Sequence Match ( AT2G36000.1 )
(BLAST)

001: MQQEALSFLS SSLPSLHHNF PSLSRLRFNN FPALSFKPNT SSSSSSFFKS PDIPSLSSTT TTTTTTETLE SSIHEKLIYL DSLGIDFLTL INRHPPLLST
101: ALSAVESVVD YMTTPPINFT LQDFRRLVSM CPELLTSPLT SHTIPVITFL LREVGVDSIF DLRQALRRRP RLLACSVDHQ LRPTLYFLQR IGILDPHKHT
201: YLLSCSVDNK LVPRIDYFEK LGFSRRSATA MFKRFPQLFN YSIAENYEPK LKYLMVEMGR DVREVLEFPQ YFSFSLENRI KPRHEACAAK GVRFPLPVML
301: KTNEAGFRDT LEVCCDSSPP LKTSRLVTVQ KDS

Arabidopsis Description

At2g36000/F11F19.9 [Source:UniProtKB/TrEMBL;Acc:Q9SJ50]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.