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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 7
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra017269.1-P Field mustard plastid 80.18 80.66
PGSC0003DMT400075363 Potato cytosol 36.64 58.65
VIT_08s0007g02500.t01 Wine grape plastid 52.55 51.78
Solyc01g007750.2.1 Tomato plastid 46.25 48.58
PGSC0003DMT400085903 Potato plastid 46.55 48.44
KRH13722 Soybean plastid 47.45 46.47
KRH43735 Soybean plastid 47.15 46.45
GSMUA_AchrUn_... Banana plastid 39.64 39.17
Zm00001d047442_P001 Maize plastid 34.83 38.93
Os03t0360600-00 Rice cytosol, mitochondrion 35.14 38.87
KXG39318 Sorghum plastid 34.83 37.06
Zm00001d029242_P001 Maize plastid 33.63 36.96
TraesCS4D01G156100.1 Wheat mitochondrion 34.53 36.62
AT2G03050.2 Thale cress cytosol, golgi, mitochondrion, plastid 31.23 36.62
TraesCS1A01G084300.1 Wheat mitochondrion 34.23 36.31
TraesCS4B01G156500.1 Wheat mitochondrion 34.23 36.31
HORVU4Hr1G045210.1 Barley plastid 35.14 34.51
AT2G34620.1 Thale cress plastid 30.93 33.99
AT3G18870.1 Thale cress plastid 24.92 30.29
AT5G55580.1 Thale cress plastid 24.02 16.13
AT4G38160.3 Thale cress cytosol, nucleus, peroxisome 18.02 15.87
AT2G44020.1 Thale cress mitochondrion 20.72 13.61
AT5G54180.1 Thale cress plastid 20.42 13.6
AT4G14605.2 Thale cress cytosol 20.12 13.59
AT2G21710.1 Thale cress plastid 24.62 12.79
AT1G78930.1 Thale cress plastid 21.92 12.35
AT4G02990.1 Thale cress plastid 18.32 11.28
Protein Annotations
Gene3D:1.25.70.10MapMan:15.6.2.2EntrezGene:818173ProteinID:AEC09189.1ArrayExpress:AT2G36000EnsemblPlantsGene:AT2G36000
RefSeq:AT2G36000TAIR:AT2G36000RefSeq:AT2G36000-TAIR-GEnsemblPlants:AT2G36000.1TAIR:AT2G36000.1EMBL:AY039871
EMBL:AY039888EMBL:AY077666GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003690
GO:GO:0003723GO:GO:0003727GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0006139GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0008380
GO:GO:0009058GO:GO:0009507GO:GO:0009536GO:GO:0009658GO:GO:0009987GO:GO:0016043
GO:GO:0019843GO:GO:0032502GO:GO:0042255InterPro:IPR038538InterPro:MTERFInterPro:MTERF_sf
RefSeq:NP_850257.1PFAM:PF02536PO:PO:0000013PO:PO:0000037PO:PO:0000230PO:PO:0000293
PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064
PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611
PO:PO:0007616PO:PO:0008019PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025
PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047
PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022
PANTHER:PTHR13068PANTHER:PTHR13068:SF46UniProt:Q9SJ50SMART:SM00733UniParc:UPI00000A90DASEG:seg
Description
At2g36000/F11F19.9 [Source:UniProtKB/TrEMBL;Acc:Q9SJ50]
Coordinates
chr2:+:15117015..15119043
Molecular Weight (calculated)
37954.9 Da
IEP (calculated)
8.973
GRAVY (calculated)
-0.146
Length
333 amino acids
Sequence
(BLAST)
001: MQQEALSFLS SSLPSLHHNF PSLSRLRFNN FPALSFKPNT SSSSSSFFKS PDIPSLSSTT TTTTTTETLE SSIHEKLIYL DSLGIDFLTL INRHPPLLST
101: ALSAVESVVD YMTTPPINFT LQDFRRLVSM CPELLTSPLT SHTIPVITFL LREVGVDSIF DLRQALRRRP RLLACSVDHQ LRPTLYFLQR IGILDPHKHT
201: YLLSCSVDNK LVPRIDYFEK LGFSRRSATA MFKRFPQLFN YSIAENYEPK LKYLMVEMGR DVREVLEFPQ YFSFSLENRI KPRHEACAAK GVRFPLPVML
301: KTNEAGFRDT LEVCCDSSPP LKTSRLVTVQ KDS
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.