Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX99300 | Canola | plastid | 87.23 | 86.91 |
| CDX92284 | Canola | plastid | 86.5 | 86.18 |
| Bra022367.1-P | Field mustard | plastid | 86.5 | 86.18 |
| KRH40190 | Soybean | cytosol | 25.18 | 62.73 |
| VIT_03s0063g02460.t01 | Wine grape | plastid | 59.12 | 58.7 |
| KRH01028 | Soybean | plastid | 52.92 | 52.92 |
| GSMUA_Achr2P08550_001 | Banana | plastid | 51.46 | 51.46 |
| Solyc01g109550.2.1 | Tomato | mitochondrion | 54.38 | 50.68 |
| PGSC0003DMT400001905 | Potato | plastid | 51.46 | 50.18 |
| AT2G34620.1 | Thale cress | plastid | 34.67 | 31.35 |
| AT2G03050.2 | Thale cress | cytosol, golgi, mitochondrion, plastid | 31.75 | 30.63 |
| AT2G36000.1 | Thale cress | plastid | 30.29 | 24.92 |
| AT4G38160.3 | Thale cress | cytosol, nucleus, peroxisome | 21.9 | 15.87 |
| AT4G14605.2 | Thale cress | cytosol | 24.45 | 13.59 |
| AT5G55580.1 | Thale cress | plastid | 24.09 | 13.31 |
| AT5G54180.1 | Thale cress | plastid | 23.36 | 12.8 |
| AT1G78930.1 | Thale cress | plastid | 27.01 | 12.52 |
| AT2G44020.1 | Thale cress | mitochondrion | 21.53 | 11.64 |
| AT4G02990.1 | Thale cress | plastid | 22.26 | 11.28 |
| AT2G21710.1 | Thale cress | plastid | 24.09 | 10.3 |
Protein Annotations
| Gene3D:1.25.70.10 | MapMan:15.6.2.2 | EntrezGene:821420 | ProteinID:AEE76162.1 | ArrayExpress:AT3G18870 | EnsemblPlantsGene:AT3G18870 |
| RefSeq:AT3G18870 | TAIR:AT3G18870 | RefSeq:AT3G18870-TAIR-G | EnsemblPlants:AT3G18870.1 | TAIR:AT3G18870.1 | Unigene:At.71275 |
| ProteinID:BAB03096.1 | EMBL:BT029467 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003690 |
| GO:GO:0003723 | GO:GO:0003727 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008380 | GO:GO:0009058 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009628 | GO:GO:0009658 |
| GO:GO:0009987 | GO:GO:0016043 | GO:GO:0019843 | GO:GO:0032502 | GO:GO:0042255 | GO:GO:0042646 |
| GO:GO:0071472 | InterPro:IPR038538 | InterPro:MTERF | InterPro:MTERF_sf | RefSeq:NP_188517.1 | PFAM:PF02536 |
| PO:PO:0000037 | PO:PO:0000293 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0008019 |
| PO:PO:0009006 | PO:PO:0009025 | PO:PO:0009047 | PO:PO:0020038 | PO:PO:0020137 | PO:PO:0025022 |
| PANTHER:PTHR13068 | PANTHER:PTHR13068:SF19 | UniProt:Q9LHN2 | SMART:SM00733 | UniParc:UPI00000A4B4A | SEG:seg |
Description
At3g18870 [Source:UniProtKB/TrEMBL;Acc:Q9LHN2]
Coordinates
chr3:-:6508385..6509343
Molecular Weight (calculated)
31433.3 Da
IEP (calculated)
10.207
GRAVY (calculated)
-0.253
Length
274 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVIASLHHL QPLSSFSSPP SPSSSKPLYL KFQTSHRENL RHLSSLGIVP QNPRLAPPAN DLSVILSAVN LLKSKGISDE DFPRLVFLCP QLFSPTFDIS
101: KLDPVFDFLT GELGASAEES RGLIVNCPNI LFSDVEYCLR PTLVYLKELG VRNLNRASKT NAHVLNTRVE KLRAKMRFLK SIGFEHEEAA RVCGRIPAIF
201: GYSVEDNLRP KFEFLVYDME RELEELKKFP QYFAFSLGKR IRPRHWHLKK KNVRVSLSRM LMWGDQKFYS KWKP
101: KLDPVFDFLT GELGASAEES RGLIVNCPNI LFSDVEYCLR PTLVYLKELG VRNLNRASKT NAHVLNTRVE KLRAKMRFLK SIGFEHEEAA RVCGRIPAIF
201: GYSVEDNLRP KFEFLVYDME RELEELKKFP QYFAFSLGKR IRPRHWHLKK KNVRVSLSRM LMWGDQKFYS KWKP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.