CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra022367.1-P	Field mustard	plastid	98.55	98.55
CDX99300	Canola	plastid	95.64	95.64
AT3G18870.1	Thale cress	plastid	86.18	86.5
KRH40190	Soybean	cytosol	26.18	65.45
VIT_03s0063g02460.t01	Wine grape	plastid	56.36	56.16
KRH01028	Soybean	plastid	53.09	53.28
GSMUA_Achr2P08550_001	Banana	plastid	50.91	51.09
Solyc01g109550.2.1	Tomato	mitochondrion	52.73	49.32
PGSC0003DMT400001905	Potato	plastid	50.18	49.11
CDY45184	Canola	extracellular, mitochondrion	34.18	32.98
CDY03022	Canola	extracellular	33.82	32.75
CDX84297	Canola	plastid	34.18	28.48
CDY29073	Canola	cytosol, plastid	22.18	18.21
CDX90610	Canola	cytosol	21.82	17.91
CDY29749	Canola	cytosol	25.45	14.29
CDY16267	Canola	cytosol	24.73	14.02
CDY36755	Canola	nucleus, vacuole	24.36	13.59
CDY66686	Canola	extracellular, vacuole	24.36	13.59
CDX79786	Canola	mitochondrion	22.91	12.78
CDY17890	Canola	mitochondrion	22.18	12.25
CDY14326	Canola	plastid	22.18	12.22
CDY18308	Canola	plastid	21.82	12.02
CDY22091	Canola	golgi, mitochondrion, plastid	22.55	11.68
CDY21931	Canola	golgi, mitochondrion, plastid	21.82	11.34
CDY13794	Canola	plastid	25.45	11.16
CDY66820	Canola	plastid	25.09	11.09

Protein Annotations

Gene3D:1.25.70.10	MapMan:15.6.2.2	GO:A0A078DUZ4	EnsemblPlants:CDX92284	ProteinID:CDX92284	ProteinID:CDX92284.1
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003690	GO:GO:0005488	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00154008001
InterPro:IPR038538	InterPro:MTERF	InterPro:MTERF_sf	PFAM:PF02536	PANTHER:PTHR13068	PANTHER:PTHR13068:SF19
SMART:SM00733	UniParc:UPI0004EF00D1	SEG:seg	:	:	:

Description

BnaA05g21230D

Coordinates

chrLK031871:-:1261028..1261855

Molecular Weight (calculated)

31197.0 Da

IEP (calculated)

10.364

GRAVY (calculated)

-0.219

Length

275 amino acids

Sequence
(BLAST)

001: MATVTASLRL QPLSSLSSSS SPPPSSRPLY LKFHTSHREN LRYLSSLGVI PQNPRLAPPV DNLPAILSAV NFLKSKGISD GDFPRLVYLC PQLFSPTFSI
101: SETNPVFDFL AGEIGASAAE SRGLIVNCPS LLLSDVEYCL RPTLVYLKEL GVKNLNRASK TNAHVLNTRV EKLRAKVRFL KSIGFEHEEA ARVCGRIPAI
201: FGYSVEDNLR PKFEFLVYDM ERELEELKKF PQYFGFSLGR RIKPRHWHLK KKGVRVSLSR MLMWGDHKFY SKWKP

Best Arabidopsis Sequence Match ( AT3G18870.1 )
(BLAST)

001: MAVIASLHHL QPLSSFSSPP SPSSSKPLYL KFQTSHRENL RHLSSLGIVP QNPRLAPPAN DLSVILSAVN LLKSKGISDE DFPRLVFLCP QLFSPTFDIS
101: KLDPVFDFLT GELGASAEES RGLIVNCPNI LFSDVEYCLR PTLVYLKELG VRNLNRASKT NAHVLNTRVE KLRAKMRFLK SIGFEHEEAA RVCGRIPAIF
201: GYSVEDNLRP KFEFLVYDME RELEELKKFP QYFAFSLGKR IRPRHWHLKK KNVRVSLSRM LMWGDQKFYS KWKP

Arabidopsis Description

At3g18870 [Source:UniProtKB/TrEMBL;Acc:Q9LHN2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.