CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH40190	Soybean	cytosol	35.4	88.18
VIT_03s0063g02460.t01	Wine grape	plastid	57.66	57.25
CDX92284	Canola	plastid	53.28	53.09
CDX99300	Canola	plastid	53.28	53.09
AT3G18870.1	Thale cress	plastid	52.92	52.92
Bra022367.1-P	Field mustard	plastid	52.92	52.73
PGSC0003DMT400001905	Potato	plastid	53.65	52.31
GSMUA_Achr2P08550_001	Banana	plastid	49.63	49.63
Solyc01g109550.2.1	Tomato	mitochondrion	52.92	49.32
KRH74890	Soybean	cytosol, plasma membrane, plastid	29.93	30.94
KRH70749	Soybean	plastid	31.39	29.15
KRH12828	Soybean	plastid	31.02	28.15
KRH37793	Soybean	plastid	29.93	25.47
KRH13722	Soybean	plastid	31.02	25.0
KRH43735	Soybean	plastid	30.29	24.56
KRH32500	Soybean	cytosol	22.63	18.51
KRH19886	Soybean	cytosol	22.63	18.51
KRH39012	Soybean	cytosol	23.36	14.32
KRH57654	Soybean	mitochondrion, plastid	23.72	13.54
KRG94311	Soybean	plastid	22.99	13.32
KRH41721	Soybean	mitochondrion	23.36	12.83
KRH60420	Soybean	cytosol	18.98	12.75
KRH64303	Soybean	nucleus	22.26	12.25
KRH73870	Soybean	plastid	21.9	12.24
KRH14270	Soybean	plastid	21.9	12.07
KRH72610	Soybean	plastid	21.9	11.58
KRH09594	Soybean	cytosol	24.82	11.49
KRH24469	Soybean	plastid	24.09	10.58
KRH29455	Soybean	mitochondrion	16.79	8.1

Protein Annotations

Gene3D:1.25.70.10	EntrezGene:100812333	MapMan:15.6.2.2	EMBL:ACUP02011489	EnsemblPlantsGene:GLYMA_18G249400	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003690	GO:GO:0003723	GO:GO:0003727	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0008380	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536
GO:GO:0009658	GO:GO:0009987	GO:GO:0016043	GO:GO:0019843	GO:GO:0032502	GO:GO:0042255
InterPro:IPR038538	UniProt:K7MUL5	EnsemblPlants:KRH01028	ProteinID:KRH01028	ProteinID:KRH01028.1	InterPro:MTERF
InterPro:MTERF_sf	PFAM:PF02536	PANTHER:PTHR13068	PANTHER:PTHR13068:SF19	SMART:SM00733	UniParc:UPI000233E86D

Description

hypothetical protein

Coordinates

chr18:+:53578398..53580345

Molecular Weight (calculated)

32025.9 Da

IEP (calculated)

10.101

GRAVY (calculated)

-0.296

Length

274 amino acids

Sequence
(BLAST)

001: MLLSYSLHLP ITSSYSHTSN RSPNSSGYIK FRTRYRENLR YLRALTIIDP KTKPEDLPLP NDVDHIIDTL TFLKSHSFSD ADIPRLKFLT PELFTTAVVP
101: SDVSAVFRFL ADDLAATKSE SRDLILRCPK LLFSHVDLCL RPTLQFLRQV GVQGLNRPTT RNAHLLNTRV DKLHAKVEFL QELGFSYEEA VRACARLPAI
201: FGYDVENNLW PKFVYLVKEM ERDLEDLKRF PQYFGFSLKE RIVPRHLHLK KRGVRIPLNR MLMWADQKFY AKWK

Best Arabidopsis Sequence Match ( AT3G18870.1 )
(BLAST)

001: MAVIASLHHL QPLSSFSSPP SPSSSKPLYL KFQTSHRENL RHLSSLGIVP QNPRLAPPAN DLSVILSAVN LLKSKGISDE DFPRLVFLCP QLFSPTFDIS
101: KLDPVFDFLT GELGASAEES RGLIVNCPNI LFSDVEYCLR PTLVYLKELG VRNLNRASKT NAHVLNTRVE KLRAKMRFLK SIGFEHEEAA RVCGRIPAIF
201: GYSVEDNLRP KFEFLVYDME RELEELKKFP QYFAFSLGKR IRPRHWHLKK KNVRVSLSRM LMWGDQKFYS KWKP

Arabidopsis Description

At3g18870 [Source:UniProtKB/TrEMBL;Acc:Q9LHN2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.