CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH57654	Soybean	mitochondrion, plastid	88.14	82.08
KRG94311	Soybean	plastid	86.58	81.82
VIT_14s0171g00230.t01	Wine grape	plastid	69.35	62.63
PGSC0003DMT400052092	Potato	mitochondrion	67.34	62.19
Solyc02g093940.2.1	Tomato	nucleus	66.89	61.78
Bra036876.1-P	Field mustard	cytosol	64.65	58.62
CDY29749	Canola	cytosol	64.21	58.57
CDY16267	Canola	cytosol	63.31	58.35
AT4G14605.2	Thale cress	cytosol	62.19	56.39
GSMUA_Achr3P02690_001	Banana	plastid	60.4	52.12
TraesCS6B01G244200.1	Wheat	plastid	53.02	48.97
TraesCS6A01G214200.1	Wheat	plastid	53.02	48.97
TraesCS6D01G196900.1	Wheat	plastid	53.02	48.87
HORVU6Hr1G054650.2	Barley	plastid	52.8	48.56
KXG30576	Sorghum	cytosol	53.24	48.37
Zm00001d017130_P001	Maize	plastid	52.57	48.35
KRH40190	Soybean	cytosol	7.16	29.09
KRH74890	Soybean	cytosol, plasma membrane, plastid	15.88	26.79
KRH12828	Soybean	plastid	17.0	25.17
KRH70749	Soybean	plastid	16.55	25.08
KRH37793	Soybean	plastid	17.9	24.84
KRH01028	Soybean	plastid	14.32	23.36
KRH19886	Soybean	cytosol	17.23	22.99
KRH32500	Soybean	cytosol	16.78	22.39
KRH43735	Soybean	plastid	15.88	21.01
KRH13722	Soybean	plastid	15.66	20.59
KRH41721	Soybean	mitochondrion	19.91	17.84
KRH60420	Soybean	cytosol	15.44	16.91
KRH73870	Soybean	plastid	18.12	16.53
KRH14270	Soybean	plastid	18.12	16.3
KRH64303	Soybean	nucleus	17.0	15.26
KRH09594	Soybean	cytosol	19.02	14.36
KRH72610	Soybean	plastid	16.55	14.29
KRH24469	Soybean	plastid	18.12	12.98
KRH29455	Soybean	mitochondrion	14.54	11.44

Protein Annotations

Gene3D:1.25.70.10	MapMan:15.6.2.2	UniProt:A0A0R0IIQ5	EMBL:ACUP02005905	EnsemblPlantsGene:GLYMA_09G171700	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003690	GO:GO:0003723	GO:GO:0003727	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0008380	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536
GO:GO:0009658	GO:GO:0009987	GO:GO:0016043	GO:GO:0019843	GO:GO:0032502	GO:GO:0042255
InterPro:IPR038538	EnsemblPlants:KRH39012	ProteinID:KRH39012	ProteinID:KRH39012.1	InterPro:MTERF	InterPro:MTERF_sf
PFAM:PF02536	PANTHER:PTHR13068	PANTHER:PTHR13068:SF9	SMART:SM00733	UniParc:UPI0006EDDEC1	SEG:seg

Description

hypothetical protein

Coordinates

chr9:+:39651208..39653083

Molecular Weight (calculated)

50732.9 Da

IEP (calculated)

8.830

GRAVY (calculated)

-0.082

Length

447 amino acids

Sequence
(BLAST)

001: MAYDMSISFF QTQLSFPAKV FFCQAKSGID GSLNLEVVSP TLLAAEKEEA KAVLTLFLKK QGLSNSVAAR TINKSDLFID HLVSKLHSKH KSWYLAGREL
101: TTLEIRDSLI PYLESLFEEH GDLLVDVVEN YPNPPVKDKS DVPVPPSSPV LDSKKLKAVS RVSAMDPDGG NLRPHIVYLM ELGMDIEQIR SITRRFPSFA
201: YYSLEGKIKP VVEFFLELGV PKEHIPTILS KRPQLCGSVY LKICEPAMKQ WPKVIYRFPA LLTYSRQKVM ESIDFLHEFG LSEESIGKIL TRCPNIVSYS
301: VEDNLRPTAN YFCSLGVDVG ILLFRCPQNF GLSIEANLKP ITTFFLERGY TLEEIGTMIS RYGALYTFSL TENLIPKWDF FLTSGYQKSD LVKFPQYFGY
401: SLEERIKPRF VIMKKSGVKL LLNQVLSLSS SNFEEALKKK MKKMQNG

Best Arabidopsis Sequence Match ( AT4G14605.2 )
(BLAST)

001: MQSLSQLGPS EIFLVARREK PSTRAQLWFT GRLSFRQETN GIRLKNRVEF SPRPVPPNLI AAEKEEAKAV LTLFFKKQGL SNSLSSRLIN KSDLFIDHLV
101: SRLHSVHKAR YLVGRELTTL EIRDSLIPYL EQLHEEHGDL LAELVVSFPD PPAEPRLVAS SPVSVLPPRG DTDSAADTRK LRAVSRVSEL DTEGALRPQT
201: LYLLDLGLNL EQIKTITRKF AAFPYYSLDG KIKPVVEFLL DLGIPKSDIP TILCKRPQIC GISLTDNLKP TMAFLETLGI DKNQWAKIIS RFPAILTYSR
301: QKLTSTVEFL SQTGLTEEQI GRILTRCPNI MSYSVEDKLR PTMEYFRSLN VDVAVLLHRC PQTFGLSIES NLKPVTEFFL EKGFGLDEIG IMISRYGALY
401: TFSLKENVMP KWDYFQTMDY PKSELVKFPQ FFGYSLQERI KPRYELVQRS GVRLLLNQVL SLSGIEFEKV VKKKMMKLVS NNVIAEQSSG GLL

Arabidopsis Description

MTERF5Transcription termination factor MTERF5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4JVI3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.