Factsheet for GSMUA_Achr3P02690_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH39012	Soybean	cytosol	52.12	60.4
VIT_14s0171g00230.t01	Wine grape	plastid	56.95	59.6
KRG94311	Soybean	plastid	53.86	58.99
KRH57654	Soybean	mitochondrion, plastid	54.63	58.96
Solyc02g093940.2.1	Tomato	nucleus	54.63	58.47
PGSC0003DMT400052092	Potato	mitochondrion	54.44	58.26
CDY29749	Canola	cytosol	54.44	57.55
CDY16267	Canola	cytosol	53.86	57.53
Bra036876.1-P	Field mustard	cytosol	54.44	57.2
TraesCS6B01G244200.1	Wheat	plastid	52.9	56.61
HORVU6Hr1G054650.2	Barley	plastid	53.09	56.58
TraesCS6D01G196900.1	Wheat	plastid	52.9	56.49
TraesCS6A01G214200.1	Wheat	plastid	52.7	56.41
Zm00001d017130_P001	Maize	plastid	52.7	56.17
AT4G14605.2	Thale cress	cytosol	53.09	55.78
KXG30576	Sorghum	cytosol	52.7	55.49
GSMUA_Achr6P31220_001	Banana	plastid	10.81	24.89
GSMUA_Achr2P08550_001	Banana	plastid	12.93	24.45
GSMUA_Achr5P23270_001	Banana	mitochondrion	13.9	23.3
GSMUA_AchrUn_...	Banana	plastid	14.29	21.96
GSMUA_AchrUn_...	Banana	cytosol	13.71	21.45
GSMUA_Achr6P02570_001	Banana	plastid	9.07	19.5
GSMUA_Achr7P20690_001	Banana	cytosol	8.3	19.46
GSMUA_Achr3P29890_001	Banana	plastid	15.83	16.17
GSMUA_Achr3P27780_001	Banana	plastid	18.73	15.9
GSMUA_Achr3P24870_001	Banana	cytosol, mitochondrion, plastid	11.2	14.87
GSMUA_Achr10P...	Banana	mitochondrion	10.62	14.82
GSMUA_Achr4P23060_001	Banana	mitochondrion	16.22	12.03

Protein Annotations

Gene3D:1.25.70.10	MapMan:15.6.2.2	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003690
GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0006950	GO:GO:0006970	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009628	GO:GO:0009651	GO:GO:0009658	GO:GO:0009719
GO:GO:0009737	GO:GO:0009987	GO:GO:0016043	EnsemblPlantsGene:GSMUA_Achr3G02690_001	EnsemblPlants:GSMUA_Achr3P02690_001	EnsemblPlants:GSMUA_Achr3T02690_001
InterPro:IPR038538	UniProt:M0SB87	InterPro:MTERF	InterPro:MTERF_sf	PFAM:PF02536	PANTHER:PTHR13068
PANTHER:PTHR13068:SF9	SMART:SM00733	SignalP:SignalP-noTM	UniParc:UPI0002960967	SEG:seg	:

Description

mTERF domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G02690_001]

Coordinates

chr3:-:1763144..1766303

Molecular Weight (calculated)

59015.0 Da

IEP (calculated)

9.766

GRAVY (calculated)

-0.175

Length

518 amino acids

Sequence
(BLAST)

001: MNTTPHHRLC LSAWLQCPVM AARRPPQSRE APPVIRPIQV TAHRRPFNRS VVSYRPTSAS RVHLTVTQQF FLCKAKTYES EVVPRNFAAI PSSLLTAERE
101: EAKAVLTMFL KKQGLSNTVA ARVINKSECF VDHLILKLHL MHKSRYLVGR ELTTLEIRGA FIPFLESLLE EHGDALVDFV ENFPDPPGIE RAASTSPVNT
201: TSSSSSSKKE RAIARVSQLS PDGLLPELVL YLVDLGMKLE QIKDIVRKFP AFAYYSLDRK IKPLVEFLLE LGVPRSDIPT ILIKRPQLCG ISFSENLKPM
301: MAYLENLGVD KSKWAKVIYR FPALLTYSRQ KVKATTDYLC ELGVSEKNIG KILTRCPHII SYSIEDKLRP TADYFQSIGI DVASLMHKCP QTFGLSIEAN
401: LKPVTEFFLE RGYSTAEVST MVHRYGALYT FSLVDNLIPK WNYFLTMDYP KSELVKFPHY FGYSLEERIK PRYSRVRECG VKLVLNQVLS VTNSQFEKIL
501: EKKREKILDA QFPQGQNK

Best Arabidopsis Sequence Match ( AT4G14605.2 )
(BLAST)

001: MQSLSQLGPS EIFLVARREK PSTRAQLWFT GRLSFRQETN GIRLKNRVEF SPRPVPPNLI AAEKEEAKAV LTLFFKKQGL SNSLSSRLIN KSDLFIDHLV
101: SRLHSVHKAR YLVGRELTTL EIRDSLIPYL EQLHEEHGDL LAELVVSFPD PPAEPRLVAS SPVSVLPPRG DTDSAADTRK LRAVSRVSEL DTEGALRPQT
201: LYLLDLGLNL EQIKTITRKF AAFPYYSLDG KIKPVVEFLL DLGIPKSDIP TILCKRPQIC GISLTDNLKP TMAFLETLGI DKNQWAKIIS RFPAILTYSR
301: QKLTSTVEFL SQTGLTEEQI GRILTRCPNI MSYSVEDKLR PTMEYFRSLN VDVAVLLHRC PQTFGLSIES NLKPVTEFFL EKGFGLDEIG IMISRYGALY
401: TFSLKENVMP KWDYFQTMDY PKSELVKFPQ FFGYSLQERI KPRYELVQRS GVRLLLNQVL SLSGIEFEKV VKKKMMKLVS NNVIAEQSSG GLL

Arabidopsis Description

MTERF5Transcription termination factor MTERF5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4JVI3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.