Factsheet for HORVU6Hr1G054650.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G244200.1	Wheat	plastid	97.33	97.73
TraesCS6D01G196900.1	Wheat	plastid	97.12	97.32
TraesCS6A01G214200.1	Wheat	plastid	96.91	97.31
KXG30576	Sorghum	cytosol	80.66	79.67
Zm00001d017130_P001	Maize	plastid	77.57	77.57
GSMUA_Achr3P02690_001	Banana	plastid	56.58	53.09
KRH39012	Soybean	cytosol	48.56	52.8
KRH57654	Soybean	mitochondrion, plastid	51.23	51.88
Solyc02g093940.2.1	Tomato	nucleus	51.23	51.45
KRG94311	Soybean	plastid	49.59	50.95
PGSC0003DMT400052092	Potato	mitochondrion	50.62	50.83
VIT_14s0171g00230.t01	Wine grape	plastid	51.65	50.71
CDY16267	Canola	cytosol	48.97	49.07
CDY29749	Canola	cytosol	49.38	48.98
Bra036876.1-P	Field mustard	cytosol	49.59	48.88
AT4G14605.2	Thale cress	cytosol	49.18	48.48
HORVU4Hr1G045210.1	Barley	plastid	16.05	23.01
HORVU7Hr1G051550.3	Barley	mitochondrion	17.9	22.48
HORVU6Hr1G051070.1	Barley	cytosol, extracellular, plastid	11.93	20.71
HORVU6Hr1G082970.1	Barley	cytosol	18.72	17.27
HORVU5Hr1G089290.3	Barley	cytosol	17.9	16.23
HORVU2Hr1G036490.17	Barley	mitochondrion	16.46	15.9
HORVU1Hr1G061210.8	Barley	plastid	15.43	15.09
HORVU0Hr1G013680.1	Barley	mitochondrion	4.12	8.62

Protein Annotations

Gene3D:1.25.70.10	MapMan:15.6.2.2	UniProt:A0A287U8H0	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003690	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0006950	GO:GO:0006970
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009628	GO:GO:0009651	GO:GO:0009658
GO:GO:0009719	GO:GO:0009737	GO:GO:0009987	GO:GO:0016043	EnsemblPlantsGene:HORVU6Hr1G054650	EnsemblPlants:HORVU6Hr1G054650.2
InterPro:IPR038538	InterPro:MTERF	InterPro:MTERF_sf	PFAM:PF02536	PANTHER:PTHR13068	PANTHER:PTHR13068:SF9
SMART:SM00733	UniParc:UPI000B464C11	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr6H:-:346245085..346249474

Molecular Weight (calculated)

54815.6 Da

IEP (calculated)

9.258

GRAVY (calculated)

-0.142

Length

486 amino acids

Sequence
(BLAST)

001: MTSLQAAPRI SLHLTPSEHL GRLLPPWRLV LSPFSSCGLY TLISRQHLIC NAQSCDADDL LVASAQSSTT ARSRLLAAER EEAKAVLSLF LRQKGLRSAV
101: AARIANKSDG FIEHLSSKLQ SAYRSRYAEG RELSTPEIRD AILPYLEALS KEHGDNLVEV VENFPDPFSA ERESLSYTMI LTPTSSNKQK AIARVSTPTS
201: GGALPELVLY LLDYGMDHEE IKNVVRKFPA FAYYNVDRKI KPLVELLLEL GVPRSGIPGI IRKRPQLCGI SLTDNLKPMM AYMENIGVNK AQWSKVICRF
301: PAFLTYSRQK VEITVSYLTE LGVSKENIGK ILTRCPHLMS YSVNDNLRPT ADYFRSIGAD AASLIQKCPQ AFGLNIESKL KPITEFFLQR EFSIEEIGIM
401: VNRFGIIHTL SLQENLIPKY EYFLTMGYPR YELVKFPQYF GYSLEQRIKP RYARMTGCGV RLILNQMLSV SESRFEEILQ KKSGGF

Best Arabidopsis Sequence Match ( AT4G14605.1 )
(BLAST)

001: MQSLSQLGPS EIFLVARREK PSTRAQLWFT GRLSFRQETN GIRLKNRVEF SPRPVPPNLI AAEKEEAKAV LTLFFKKQGL SNSLSSRLIN KSDLFIDHLV
101: SRLHSVHKAR YLVGRELTTL EIRDSLIPYL EQLHEEHGDL LAELVVSFPD PPAEPRLVAS SPVSVLPPRG DTDSAADTRK LRAVSRVSEL DTEGALRPQT
201: LYLLDLGLNL EQIKTITRKF AAFPYYSLDG KIKPVVEFLL DLGIPKSDIP TILCKRPQIC GISLTDNLKP TMAFLETLGI DKNQWAKIIS RFPAILTYSR
301: QKLTSTVEFL SQTGLTEEQI GRILTRCPNI MSYSVEDKLR PTMEYFRSLN VDVAVLLHRC PQTFGLSIES NLKPVTEFFL EKGFGLDEIG IMISRYGALY
401: TFSLKENVMP KWDYFQTMDY PKSELVKFPQ FFGYSLQERI KPRYELVQRS GVRLLLNQVL SLSGIEFEKV VKKKMMKLVS NNVIAEQSSG GLL

Arabidopsis Description

MTERF5Transcription termination factor MTERF5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4JVI3]
SUBAcon: [cytosol,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.