Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G372800.1 | Wheat | plastid | 93.84 | 85.98 |
| TraesCS5B01G365700.1 | Wheat | plastid | 92.54 | 84.79 |
| HORVU0Hr1G013680.1 | Barley | mitochondrion | 31.72 | 73.28 |
| OQU89932 | Sorghum | plastid | 80.41 | 70.77 |
| Zm00001d027230_P001 | Maize | plastid | 78.54 | 68.68 |
| Zm00001d021376_P001 | Maize | cytosol | 78.17 | 65.26 |
| GSMUA_Achr3P27780_001 | Banana | plastid | 58.02 | 50.98 |
| VIT_09s0054g01030.t01 | Wine grape | plastid | 51.12 | 45.59 |
| AT1G78930.1 | Thale cress | plastid | 47.01 | 42.64 |
| PGSC0003DMT400023772 | Potato | plastid | 46.83 | 42.04 |
| Solyc03g124040.2.1 | Tomato | golgi, plastid | 44.59 | 41.64 |
| KRH09594 | Soybean | cytosol | 42.72 | 38.68 |
| HORVU7Hr1G051550.3 | Barley | mitochondrion | 14.74 | 20.41 |
| HORVU6Hr1G051070.1 | Barley | cytosol, extracellular, plastid | 10.63 | 20.36 |
| HORVU1Hr1G061210.8 | Barley | plastid | 16.98 | 18.31 |
| HORVU6Hr1G082970.1 | Barley | cytosol | 17.91 | 18.22 |
| HORVU4Hr1G045210.1 | Barley | plastid | 11.38 | 17.99 |
| HORVU6Hr1G054650.2 | Barley | plastid | 16.23 | 17.9 |
| HORVU2Hr1G036490.17 | Barley | mitochondrion | 14.18 | 15.11 |
Protein Annotations
| Gene3D:1.25.70.10 | MapMan:15.6.2.2 | UniProt:A0A287S766 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003690 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:HORVU5Hr1G089290 | EnsemblPlants:HORVU5Hr1G089290.3 | InterPro:IPR038538 | InterPro:MTERF |
| InterPro:MTERF_sf | PFAM:PF02536 | PANTHER:PTHR13068 | PANTHER:PTHR13068:SF42 | SMART:SM00733 | UniParc:UPI000B46F5F3 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:+:584697990..584701650
Molecular Weight (calculated)
59878.0 Da
IEP (calculated)
9.293
GRAVY (calculated)
0.102
Length
536 amino acids
Sequence
(BLAST)
(BLAST)
001: APAAAHAASS LSSARGDPRE AEAAVAELLR DHGASPEDAA AIAARAPGYA DMLADGVREL DELGLWASWS AGAGAGAGAE MGALAFGRKV YFMGRSRRDG
101: AVVPLIESLG VRLSSAKLIA PYVAAEGLPV LIHRVKFLKE MLFSGSGYET LIGRNAKRMM MHFSIPADEA LQTTLSFFEK MEARHGGLSM LAHGDVSFPY
201: LIESFPMLLL CSEENHLKPL IDFLEHIGIP KPRIPSVLLA FPPIILSDVE KDIKPRIHAW EKAGIEQEYI GRMLLKYPWI LSASVIENYK QTLLFFNRRK
301: IASTALGMAV KSWPHILGCS TTRMNSILVL FDDLGISKKM VVPVLTSSPQ LLLRKPNEFL QVVSFFKDMG FDKKVVAKIV CRSPEIFASD VENTLKKKID
401: FLIDFGICER HLPRIIKKYP ELLLLDINRT LLPRMNYLLG MGLCKKDVCS MISRFSPLLG YSIELVMKPK LEFLLRTMKK PLKAIVEYPR YFSYSLEGRI
501: KPRFWIIKSR NIDCSLTDMF AKNNELFAEE YLGIET
101: AVVPLIESLG VRLSSAKLIA PYVAAEGLPV LIHRVKFLKE MLFSGSGYET LIGRNAKRMM MHFSIPADEA LQTTLSFFEK MEARHGGLSM LAHGDVSFPY
201: LIESFPMLLL CSEENHLKPL IDFLEHIGIP KPRIPSVLLA FPPIILSDVE KDIKPRIHAW EKAGIEQEYI GRMLLKYPWI LSASVIENYK QTLLFFNRRK
301: IASTALGMAV KSWPHILGCS TTRMNSILVL FDDLGISKKM VVPVLTSSPQ LLLRKPNEFL QVVSFFKDMG FDKKVVAKIV CRSPEIFASD VENTLKKKID
401: FLIDFGICER HLPRIIKKYP ELLLLDINRT LLPRMNYLLG MGLCKKDVCS MISRFSPLLG YSIELVMKPK LEFLLRTMKK PLKAIVEYPR YFSYSLEGRI
501: KPRFWIIKSR NIDCSLTDMF AKNNELFAEE YLGIET
001: MELLHTSCNF ETLTLISPPL KSCNFSSSSL FFSPRRVTLF PAYHSGRVTV SASLQHGDSN FSSNSSQTNQ EAQNSIAGFL RRDTGLSEAD SDFISSNCPK
101: YTRMIVEGVR DLEEWNSWKG SGESERVEEG LGFKEKVIYM VKQKGDGGKV AFLESLGLSL SSAMYLAHYV SSESLPILLD KVKYLKEIFF SGSDEKGLVG
201: KYARRMMLYL SIPIDEDVQQ TLSFFEKIEA RRGGLDMLGS VDASFRFLLE SFPRLLLLSE ENDMKPMVEF LESIGIPKYC LGKVLLLYPP IMLGKTEEIK
301: RRVATAMEKV SVVNKDSGKL LLKYPWILSP SIQENYSHIG SFFYSESVLK MDIDHAIRRW PLLLGCSASN MEMMVKEFDK LGVRDKRMGK VIPKMPQLLL
401: CKPQEFLKVV CFLEDLGFQK EIVGQILCRC PEIFGCSIEK TLQKKLIFLT RFGVSTTHFP RIIKKYPEFL IYDADKTVLP RLKYLMEIGI SEREIAFMIR
501: KFSPILGYSI DKVLRPKFEF LVNSMEKPVR EVIEYPRYFS YSLEKRIKPR FRVLKGRNIE CTLQEMLGKN DEEFAADFLG LGELQTHSEI S
101: YTRMIVEGVR DLEEWNSWKG SGESERVEEG LGFKEKVIYM VKQKGDGGKV AFLESLGLSL SSAMYLAHYV SSESLPILLD KVKYLKEIFF SGSDEKGLVG
201: KYARRMMLYL SIPIDEDVQQ TLSFFEKIEA RRGGLDMLGS VDASFRFLLE SFPRLLLLSE ENDMKPMVEF LESIGIPKYC LGKVLLLYPP IMLGKTEEIK
301: RRVATAMEKV SVVNKDSGKL LLKYPWILSP SIQENYSHIG SFFYSESVLK MDIDHAIRRW PLLLGCSASN MEMMVKEFDK LGVRDKRMGK VIPKMPQLLL
401: CKPQEFLKVV CFLEDLGFQK EIVGQILCRC PEIFGCSIEK TLQKKLIFLT RFGVSTTHFP RIIKKYPEFL IYDADKTVLP RLKYLMEIGI SEREIAFMIR
501: KFSPILGYSI DKVLRPKFEF LVNSMEKPVR EVIEYPRYFS YSLEKRIKPR FRVLKGRNIE CTLQEMLGKN DEEFAADFLG LGELQTHSEI S
Arabidopsis Description
Mitochondrial transcription termination factor family protein [Source:UniProtKB/TrEMBL;Acc:Q0WRV2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.