Factsheet for HORVU0Hr1G013680.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G089290.3	Barley	cytosol	73.28	31.72
TraesCS5A01G363600.1	Wheat	plastid	68.53	27.8
Os09t0560100-00	Rice	plasma membrane, plastid	60.78	23.04
GSMUA_Achr3P27780_001	Banana	plastid	49.57	18.85
VIT_09s0054g01030.t01	Wine grape	plastid	43.97	16.97
AT1G78930.1	Thale cress	plastid	40.52	15.91
Solyc03g124040.2.1	Tomato	golgi, plastid	38.79	15.68
PGSC0003DMT400023772	Potato	plastid	39.66	15.41
KRH09594	Soybean	cytosol	34.91	13.68
HORVU6Hr1G051070.1	Barley	cytosol, extracellular, plastid	8.19	6.79
HORVU7Hr1G051550.3	Barley	mitochondrion	8.19	4.91
HORVU6Hr1G082970.1	Barley	cytosol	10.78	4.74
HORVU1Hr1G061210.8	Barley	plastid	9.91	4.63
HORVU6Hr1G054650.2	Barley	plastid	8.62	4.12
HORVU2Hr1G036490.17	Barley	mitochondrion	8.62	3.98
HORVU4Hr1G045210.1	Barley	plastid	3.45	2.36

Protein Annotations

Gene3D:1.25.70.10	MapMan:15.6.2.2	UniProt:A0A287E0Z9	ncoils:Coil	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003690	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU0Hr1G013680	EnsemblPlants:HORVU0Hr1G013680.1	InterPro:IPR038538
InterPro:MTERF	InterPro:MTERF_sf	PFAM:PF02536	PANTHER:PTHR13068	PANTHER:PTHR13068:SF42	SMART:SM00733
UniParc:UPI000B4649F3	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchrUn:-:77385749..77387253

Molecular Weight (calculated)

20193.3 Da

IEP (calculated)

8.687

GRAVY (calculated)

0.191

Length

232 amino acids

Sequence
(BLAST)

001: MLFSGSGYET LIGRNAKRMM MHFSIPADEA LQTTLSFFEK MEARHGGLSM LAHGDVSFPY LIESFPMLLL CSEENHLKPL IDFLEHIGIP KPRIPSVLLA
101: FPPIILSDVE KDIKPXXXXX XXXXXXXXXX XXMLLKYPWI LSASVIENYK QTLLFFNRRK XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXKM
201: VVPVLTSSPQ LLLRKPNEFL QVCNYLVALL SI

Best Arabidopsis Sequence Match ( AT1G78930.1 )
(BLAST)

001: MELLHTSCNF ETLTLISPPL KSCNFSSSSL FFSPRRVTLF PAYHSGRVTV SASLQHGDSN FSSNSSQTNQ EAQNSIAGFL RRDTGLSEAD SDFISSNCPK
101: YTRMIVEGVR DLEEWNSWKG SGESERVEEG LGFKEKVIYM VKQKGDGGKV AFLESLGLSL SSAMYLAHYV SSESLPILLD KVKYLKEIFF SGSDEKGLVG
201: KYARRMMLYL SIPIDEDVQQ TLSFFEKIEA RRGGLDMLGS VDASFRFLLE SFPRLLLLSE ENDMKPMVEF LESIGIPKYC LGKVLLLYPP IMLGKTEEIK
301: RRVATAMEKV SVVNKDSGKL LLKYPWILSP SIQENYSHIG SFFYSESVLK MDIDHAIRRW PLLLGCSASN MEMMVKEFDK LGVRDKRMGK VIPKMPQLLL
401: CKPQEFLKVV CFLEDLGFQK EIVGQILCRC PEIFGCSIEK TLQKKLIFLT RFGVSTTHFP RIIKKYPEFL IYDADKTVLP RLKYLMEIGI SEREIAFMIR
501: KFSPILGYSI DKVLRPKFEF LVNSMEKPVR EVIEYPRYFS YSLEKRIKPR FRVLKGRNIE CTLQEMLGKN DEEFAADFLG LGELQTHSEI S

Arabidopsis Description

Mitochondrial transcription termination factor family protein [Source:UniProtKB/TrEMBL;Acc:Q0WRV2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.