Factsheet for Os09t0560100-00

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

plastid 6
peroxisome 1
cytosol 1
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, plastid
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:	plastid
EpiLoc:	peroxisome
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion, plastid
Predotar:	secretory
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G372800.1	Wheat	plastid	73.04	76.41
TraesCS5B01G365700.1	Wheat	plastid	72.06	75.38
OQU89932	Sorghum	plastid	74.67	75.04
TraesCS5A01G363600.1	Wheat	plastid	68.63	73.43
Zm00001d027230_P001	Maize	plastid	73.53	73.41
Zm00001d021376_P001	Maize	cytosol	72.55	69.16
HORVU0Hr1G013680.1	Barley	mitochondrion	23.04	60.78
GSMUA_Achr3P27780_001	Banana	plastid	54.58	54.75
VIT_09s0054g01030.t01	Wine grape	plastid	45.42	46.26
Solyc03g124040.2.1	Tomato	golgi, plastid	42.48	45.3
PGSC0003DMT400023772	Potato	plastid	43.63	44.72
AT1G78930.1	Thale cress	plastid	42.65	44.16
KRH09594	Soybean	cytosol	40.2	41.55
Os03t0360600-00	Rice	cytosol, mitochondrion	12.09	24.58
Os08t0515800-01	Rice	cytosol	12.75	23.42
Os03t0785200-01	Rice	plastid	11.27	22.26
Os02t0577501-00	Rice	plastid	9.8	21.28
Os02t0783100-01	Rice	mitochondrion	16.67	21.03
Os05t0404000-01	Rice	plastid	15.69	18.9
Os07t0583200-01	Rice	endoplasmic reticulum, plastid	13.24	16.1
Os07t0134700-00	Rice	plastid	15.2	15.3

Protein Annotations

Gene3D:1.25.70.10	MapMan:15.6.2.2	UniProt:A0A0P0XQC4	ProteinID:BAT09393.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003690	GO:GO:0003723	GO:GO:0003727	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0008380	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009658
GO:GO:0009987	GO:GO:0016043	GO:GO:0019843	GO:GO:0032502	GO:GO:0042255	InterPro:IPR038538
InterPro:MTERF	InterPro:MTERF_sf	EnsemblPlantsGene:Os09g0560100	EnsemblPlants:Os09t0560100-00	PFAM:PF02536	PANTHER:PTHR13068
PANTHER:PTHR13068:SF42	SMART:SM00733	SignalP:SignalP-noTM	UniParc:UPI0003939F64	SEG:seg	:

Description

Hypothetical conserved gene. (Os09t0560100-00)

Coordinates

chr9:+:22256035..22259743

Molecular Weight (calculated)

68680.0 Da

IEP (calculated)

9.940

GRAVY (calculated)

0.011

Length

612 amino acids

Sequence
(BLAST)

001: MATATATAAL ALLSPPLPAS PTPPPPPPLR AILLKQPFLR PIRQRRRLSP RPLLRRRDPV AACAPTADAE TASTSRSYDA LEAERAVAEL LREHGASPAD
101: AASIAARAPG YAAMLADGVR ELDELGLWES WSSGAGAGRE VEMAGLGFGR KVYYMGKAKS RRDRGVVPLL ESVGVRLSSA KLIAPYVSAA GLPVLIDRIK
201: FLKEILFSSN VYETLISRNA KRMMMHLSIP ADESLQSTLS FFEKMEARYG GLNMLGHGDV SFPYLIESFP MLLLCSENNH LKPLIDFLQY IGIPKPRIAS
301: VLLSFPPIIL SDVENDIKPR INAWEKVGIE QEYIGRMLLK YPWILSTCVL ENYGQMLMFF QRRKISSTVL GVAMRSWPHI LGCSTKRMNS IVELFDDLGI
401: SKKMLVPVVT SSPQLLLRKP NEVMQIILFF KDMGLDKKTV AKILCRSPEI FASSVENTLK KKINFLIDFG VPKHYLPRII RKYPELLLLD INRTMLPRIN
501: YLLDMGLSKK NVCSMIYRFS PLLGYSIELV MKPKLEFLLR TMKKPLKAVV EYPRYFSYSL EGRIKPRFCV LQSRKIDCSL TDMLAKNDEL FAEEYLGVGR
601: SLETDIQSSE GV

Best Arabidopsis Sequence Match ( AT1G78930.1 )
(BLAST)

001: MELLHTSCNF ETLTLISPPL KSCNFSSSSL FFSPRRVTLF PAYHSGRVTV SASLQHGDSN FSSNSSQTNQ EAQNSIAGFL RRDTGLSEAD SDFISSNCPK
101: YTRMIVEGVR DLEEWNSWKG SGESERVEEG LGFKEKVIYM VKQKGDGGKV AFLESLGLSL SSAMYLAHYV SSESLPILLD KVKYLKEIFF SGSDEKGLVG
201: KYARRMMLYL SIPIDEDVQQ TLSFFEKIEA RRGGLDMLGS VDASFRFLLE SFPRLLLLSE ENDMKPMVEF LESIGIPKYC LGKVLLLYPP IMLGKTEEIK
301: RRVATAMEKV SVVNKDSGKL LLKYPWILSP SIQENYSHIG SFFYSESVLK MDIDHAIRRW PLLLGCSASN MEMMVKEFDK LGVRDKRMGK VIPKMPQLLL
401: CKPQEFLKVV CFLEDLGFQK EIVGQILCRC PEIFGCSIEK TLQKKLIFLT RFGVSTTHFP RIIKKYPEFL IYDADKTVLP RLKYLMEIGI SEREIAFMIR
501: KFSPILGYSI DKVLRPKFEF LVNSMEKPVR EVIEYPRYFS YSLEKRIKPR FRVLKGRNIE CTLQEMLGKN DEEFAADFLG LGELQTHSEI S

Arabidopsis Description

Mitochondrial transcription termination factor family protein [Source:UniProtKB/TrEMBL;Acc:Q0WRV2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.