Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G365700.1 | Wheat | plastid | 91.61 | 89.57 |
| TraesCS5D01G372800.1 | Wheat | plastid | 89.51 | 87.52 |
| OQU89932 | Sorghum | plastid | 73.08 | 68.64 |
| Os09t0560100-00 | Rice | plasma membrane, plastid | 73.43 | 68.63 |
| HORVU0Hr1G013680.1 | Barley | mitochondrion | 27.8 | 68.53 |
| Zm00001d027230_P001 | Maize | plastid | 71.15 | 66.39 |
| Zm00001d021376_P001 | Maize | cytosol | 70.8 | 63.08 |
| GSMUA_Achr3P27780_001 | Banana | plastid | 53.67 | 50.33 |
| VIT_09s0054g01030.t01 | Wine grape | plastid | 45.1 | 42.93 |
| PGSC0003DMT400023772 | Potato | plastid | 41.61 | 39.87 |
| Solyc03g124040.2.1 | Tomato | golgi, plastid | 39.86 | 39.72 |
| AT1G78930.1 | Thale cress | plastid | 40.91 | 39.59 |
| KRH09594 | Soybean | cytosol | 37.24 | 35.98 |
| TraesCS7A01G250000.3 | Wheat | cytosol | 12.94 | 22.22 |
| TraesCS2A01G284000.1 | Wheat | cytosol | 4.02 | 17.04 |
| TraesCS5A01G423600.1 | Wheat | plastid | 9.44 | 16.88 |
| TraesCS6A01G214200.1 | Wheat | plastid | 14.16 | 16.74 |
| TraesCS1A01G252300.1 | Wheat | cytosol | 11.01 | 15.91 |
| TraesCS1A01G084300.1 | Wheat | mitochondrion | 8.57 | 15.61 |
| TraesCS2A01G255200.1 | Wheat | cytosol | 12.59 | 15.55 |
| TraesCS6A01G201500.1 | Wheat | extracellular, mitochondrion, plastid | 7.52 | 15.36 |
| TraesCS6A01G343900.1 | Wheat | plastid | 14.16 | 15.0 |
| TraesCS2A01G189200.1 | Wheat | plastid | 12.76 | 14.63 |
Protein Annotations
| Gene3D:1.25.70.10 | MapMan:15.6.2.2 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003690 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR038538 | InterPro:MTERF | InterPro:MTERF_sf | PFAM:PF02536 | PANTHER:PTHR13068 |
| PANTHER:PTHR13068:SF42 | SMART:SM00733 | EnsemblPlantsGene:TraesCS5A01G363600 | EnsemblPlants:TraesCS5A01G363600.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr5A:+:564170996..564174967
Molecular Weight (calculated)
63287.2 Da
IEP (calculated)
10.378
GRAVY (calculated)
0.096
Length
572 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMATFAATP ALLSPSPPYT PAPPLRGRPP RPPLRLGLRL PRRRPVTTTT PAAAHAASSL SSARGDPREA EAAVAELLRD HGASPEDAAA IAARAPGYAA
101: MLADGVRELD ELGLWASWSA GAGARAGAEM GALGFGRKVY FMGRSRRDGA VVPLVESLGV RLSSAKLIAP YVAAEGLPVL IRRVKFLKEM LFSSSGYETL
201: IGRNAKRMMA HLSIPADEAL QSTLSFFEKM EARHGGLSML AHGDVSFPYL IESFPVLLLC SEDKHLKALI DFLEHIGVPK PRIPSVLLAF PPIILSDVEK
301: DIKPRIHAWE KAGIEQEYIG RMLLKYPWIL SASVIENYKQ ALLFFNRRKI SSTFLGIAVK SWPHILGCST TRMNSILVLF DDLGISKKML VPVLTSSPQL
401: LLRKPNEFLQ VVSFFKDMGF DKITVAKIVC RSPEIFASDV ENTLKKKINF LIDFGISERH LPRIIKKYPE LLLLDINRTL LPRMNYFLGM GLSKKDVCSM
501: ISRFSPLLGY SIEHVLKPKI DFLLQTMKKP LKAVVEYPSF MIPSGSGRLF YRWEATSRVF NIHKTLSIGI SP
101: MLADGVRELD ELGLWASWSA GAGARAGAEM GALGFGRKVY FMGRSRRDGA VVPLVESLGV RLSSAKLIAP YVAAEGLPVL IRRVKFLKEM LFSSSGYETL
201: IGRNAKRMMA HLSIPADEAL QSTLSFFEKM EARHGGLSML AHGDVSFPYL IESFPVLLLC SEDKHLKALI DFLEHIGVPK PRIPSVLLAF PPIILSDVEK
301: DIKPRIHAWE KAGIEQEYIG RMLLKYPWIL SASVIENYKQ ALLFFNRRKI SSTFLGIAVK SWPHILGCST TRMNSILVLF DDLGISKKML VPVLTSSPQL
401: LLRKPNEFLQ VVSFFKDMGF DKITVAKIVC RSPEIFASDV ENTLKKKINF LIDFGISERH LPRIIKKYPE LLLLDINRTL LPRMNYFLGM GLSKKDVCSM
501: ISRFSPLLGY SIEHVLKPKI DFLLQTMKKP LKAVVEYPSF MIPSGSGRLF YRWEATSRVF NIHKTLSIGI SP
001: MELLHTSCNF ETLTLISPPL KSCNFSSSSL FFSPRRVTLF PAYHSGRVTV SASLQHGDSN FSSNSSQTNQ EAQNSIAGFL RRDTGLSEAD SDFISSNCPK
101: YTRMIVEGVR DLEEWNSWKG SGESERVEEG LGFKEKVIYM VKQKGDGGKV AFLESLGLSL SSAMYLAHYV SSESLPILLD KVKYLKEIFF SGSDEKGLVG
201: KYARRMMLYL SIPIDEDVQQ TLSFFEKIEA RRGGLDMLGS VDASFRFLLE SFPRLLLLSE ENDMKPMVEF LESIGIPKYC LGKVLLLYPP IMLGKTEEIK
301: RRVATAMEKV SVVNKDSGKL LLKYPWILSP SIQENYSHIG SFFYSESVLK MDIDHAIRRW PLLLGCSASN MEMMVKEFDK LGVRDKRMGK VIPKMPQLLL
401: CKPQEFLKVV CFLEDLGFQK EIVGQILCRC PEIFGCSIEK TLQKKLIFLT RFGVSTTHFP RIIKKYPEFL IYDADKTVLP RLKYLMEIGI SEREIAFMIR
501: KFSPILGYSI DKVLRPKFEF LVNSMEKPVR EVIEYPRYFS YSLEKRIKPR FRVLKGRNIE CTLQEMLGKN DEEFAADFLG LGELQTHSEI S
101: YTRMIVEGVR DLEEWNSWKG SGESERVEEG LGFKEKVIYM VKQKGDGGKV AFLESLGLSL SSAMYLAHYV SSESLPILLD KVKYLKEIFF SGSDEKGLVG
201: KYARRMMLYL SIPIDEDVQQ TLSFFEKIEA RRGGLDMLGS VDASFRFLLE SFPRLLLLSE ENDMKPMVEF LESIGIPKYC LGKVLLLYPP IMLGKTEEIK
301: RRVATAMEKV SVVNKDSGKL LLKYPWILSP SIQENYSHIG SFFYSESVLK MDIDHAIRRW PLLLGCSASN MEMMVKEFDK LGVRDKRMGK VIPKMPQLLL
401: CKPQEFLKVV CFLEDLGFQK EIVGQILCRC PEIFGCSIEK TLQKKLIFLT RFGVSTTHFP RIIKKYPEFL IYDADKTVLP RLKYLMEIGI SEREIAFMIR
501: KFSPILGYSI DKVLRPKFEF LVNSMEKPVR EVIEYPRYFS YSLEKRIKPR FRVLKGRNIE CTLQEMLGKN DEEFAADFLG LGELQTHSEI S
Arabidopsis Description
Mitochondrial transcription termination factor family protein [Source:UniProtKB/TrEMBL;Acc:Q0WRV2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.