Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d027230_P001 | Maize | plastid | 90.19 | 94.45 |
| OQU89932 | Sorghum | plastid | 85.83 | 90.48 |
| HORVU5Hr1G089290.3 | Barley | cytosol | 65.26 | 78.17 |
| TraesCS5D01G372800.1 | Wheat | plastid | 67.76 | 74.36 |
| TraesCS5B01G365700.1 | Wheat | plastid | 66.36 | 72.82 |
| Os09t0560100-00 | Rice | plasma membrane, plastid | 69.16 | 72.55 |
| TraesCS5A01G363600.1 | Wheat | plastid | 63.08 | 70.8 |
| GSMUA_Achr3P27780_001 | Banana | plastid | 51.4 | 54.1 |
| VIT_09s0054g01030.t01 | Wine grape | plastid | 42.21 | 45.09 |
| PGSC0003DMT400023772 | Potato | plastid | 40.97 | 44.05 |
| AT1G78930.1 | Thale cress | plastid | 40.34 | 43.82 |
| Solyc03g124040.2.1 | Tomato | golgi, plastid | 39.1 | 43.73 |
| KRH09594 | Soybean | cytosol | 37.23 | 40.37 |
| Zm00001d049743_P001 | Maize | cytosol, mitochondrion, nucleus | 13.4 | 25.75 |
| Zm00001d029242_P001 | Maize | plastid | 10.59 | 22.44 |
| Zm00001d050886_P001 | Maize | mitochondrion | 9.5 | 21.86 |
| Zm00001d047442_P001 | Maize | plastid | 10.12 | 21.81 |
| Zm00001d017130_P001 | Maize | plastid | 15.58 | 20.58 |
| Zm00001d052081_P003 | Maize | mitochondrion | 14.8 | 19.43 |
| Zm00001d010340_P001 | Maize | plastid | 14.49 | 18.83 |
| Zm00001d011574_P001 | Maize | cytosol, extracellular, plastid | 3.89 | 16.34 |
| Zm00001d018756_P001 | Maize | plastid | 15.11 | 15.85 |
| Zm00001d006700_P003 | Maize | mitochondrion, plastid | 12.77 | 14.24 |
Protein Annotations
| Gene3D:1.25.70.10 | EntrezGene:100383444 | MapMan:15.6.2.2 | UniProt:A0A1D6IAI4 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003690 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR038538 | InterPro:MTERF | InterPro:MTERF_sf |
| ProteinID:ONM56984.1 | PFAM:PF02536 | PANTHER:PTHR13068 | PANTHER:PTHR13068:SF42 | SMART:SM00733 | UniParc:UPI0008430EAB |
| EnsemblPlantsGene:Zm00001d021376 | EnsemblPlants:Zm00001d021376_P001 | EnsemblPlants:Zm00001d021376_T001 | SEG:seg | : | : |
Description
mTERF-domain protein16Mitochondrial transcription termination factor family protein
Coordinates
chr7:-:150246031..150250848
Molecular Weight (calculated)
71801.7 Da
IEP (calculated)
9.569
GRAVY (calculated)
0.083
Length
642 amino acids
Sequence
(BLAST)
(BLAST)
001: MRWIMHAVTE KDTACEDSLL WPSLQPSAVA MAAAATFGFL HPLIRKPLVP PLYILPLPTQ PHAKTHPRSL PLLFLLPRRR RGGPIAALPN TTSSSTNASA
101: SPTYDVREAE AAVADLLREG GASADDAAAI AARAPAYAAM LADGVRELDE LGLWASWSSG ASARLGLSGV VEMEMGRLGF RRKVYLMGRS RPDHDVVPLL
201: ESLGVRLSSA KLIAPYVASA GLTVLIDRVK FLKEMLFSSS DYAILIGRNA KRMMTYLSIP ADDALQSTLS FFEKMEARYG GVSMLGHGDM SFPYLIESFP
301: MLLLCSEDNH LEPLVDFLEH IGIPKPKIAS VLLLFPPIIL SDVENDIKPR IREWEKAGIE HDYITRMLLK YPWILSTSVI ENYSKMLLFF NQKGISSTVL
401: AIAVKSWPHI LGSSSKRMNS VLELFRVLGI SKKMVVPVIT SSPQLLLRKP DQFMQNVLFF REMGVDKKTT GKILCRSPEI FASNVDNTLK KKIDFLINFG
501: VSKHHLPRII RKYPELLLLD LNCTLLPRIN YLLEMGLSKK DLCSMISRFS PLLGYSIELV MKPKLEFLLR TMKKPLKAVV EYPRYFSYSL EGKIKPRFWL
601: LQSRNIDCTL TEMLAKNDEL FAEEYLELGG LLEKPVQSSI GG
101: SPTYDVREAE AAVADLLREG GASADDAAAI AARAPAYAAM LADGVRELDE LGLWASWSSG ASARLGLSGV VEMEMGRLGF RRKVYLMGRS RPDHDVVPLL
201: ESLGVRLSSA KLIAPYVASA GLTVLIDRVK FLKEMLFSSS DYAILIGRNA KRMMTYLSIP ADDALQSTLS FFEKMEARYG GVSMLGHGDM SFPYLIESFP
301: MLLLCSEDNH LEPLVDFLEH IGIPKPKIAS VLLLFPPIIL SDVENDIKPR IREWEKAGIE HDYITRMLLK YPWILSTSVI ENYSKMLLFF NQKGISSTVL
401: AIAVKSWPHI LGSSSKRMNS VLELFRVLGI SKKMVVPVIT SSPQLLLRKP DQFMQNVLFF REMGVDKKTT GKILCRSPEI FASNVDNTLK KKIDFLINFG
501: VSKHHLPRII RKYPELLLLD LNCTLLPRIN YLLEMGLSKK DLCSMISRFS PLLGYSIELV MKPKLEFLLR TMKKPLKAVV EYPRYFSYSL EGKIKPRFWL
601: LQSRNIDCTL TEMLAKNDEL FAEEYLELGG LLEKPVQSSI GG
001: MELLHTSCNF ETLTLISPPL KSCNFSSSSL FFSPRRVTLF PAYHSGRVTV SASLQHGDSN FSSNSSQTNQ EAQNSIAGFL RRDTGLSEAD SDFISSNCPK
101: YTRMIVEGVR DLEEWNSWKG SGESERVEEG LGFKEKVIYM VKQKGDGGKV AFLESLGLSL SSAMYLAHYV SSESLPILLD KVKYLKEIFF SGSDEKGLVG
201: KYARRMMLYL SIPIDEDVQQ TLSFFEKIEA RRGGLDMLGS VDASFRFLLE SFPRLLLLSE ENDMKPMVEF LESIGIPKYC LGKVLLLYPP IMLGKTEEIK
301: RRVATAMEKV SVVNKDSGKL LLKYPWILSP SIQENYSHIG SFFYSESVLK MDIDHAIRRW PLLLGCSASN MEMMVKEFDK LGVRDKRMGK VIPKMPQLLL
401: CKPQEFLKVV CFLEDLGFQK EIVGQILCRC PEIFGCSIEK TLQKKLIFLT RFGVSTTHFP RIIKKYPEFL IYDADKTVLP RLKYLMEIGI SEREIAFMIR
501: KFSPILGYSI DKVLRPKFEF LVNSMEKPVR EVIEYPRYFS YSLEKRIKPR FRVLKGRNIE CTLQEMLGKN DEEFAADFLG LGELQTHSEI S
101: YTRMIVEGVR DLEEWNSWKG SGESERVEEG LGFKEKVIYM VKQKGDGGKV AFLESLGLSL SSAMYLAHYV SSESLPILLD KVKYLKEIFF SGSDEKGLVG
201: KYARRMMLYL SIPIDEDVQQ TLSFFEKIEA RRGGLDMLGS VDASFRFLLE SFPRLLLLSE ENDMKPMVEF LESIGIPKYC LGKVLLLYPP IMLGKTEEIK
301: RRVATAMEKV SVVNKDSGKL LLKYPWILSP SIQENYSHIG SFFYSESVLK MDIDHAIRRW PLLLGCSASN MEMMVKEFDK LGVRDKRMGK VIPKMPQLLL
401: CKPQEFLKVV CFLEDLGFQK EIVGQILCRC PEIFGCSIEK TLQKKLIFLT RFGVSTTHFP RIIKKYPEFL IYDADKTVLP RLKYLMEIGI SEREIAFMIR
501: KFSPILGYSI DKVLRPKFEF LVNSMEKPVR EVIEYPRYFS YSLEKRIKPR FRVLKGRNIE CTLQEMLGKN DEEFAADFLG LGELQTHSEI S
Arabidopsis Description
Mitochondrial transcription termination factor family protein [Source:UniProtKB/TrEMBL;Acc:Q0WRV2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.