Factsheet for Zm00001d052081_P003

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

mitochondrion: 27297264
plasma membrane: 27341663

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES07645	Sorghum	mitochondrion	96.93	96.93
Os02t0783100-01	Rice	mitochondrion	88.14	88.87
TraesCS6D01G325000.1	Wheat	mitochondrion	87.53	87.17
TraesCS6B01G376100.1	Wheat	mitochondrion	87.12	86.76
HORVU6Hr1G082970.1	Barley	cytosol	87.12	80.83
TraesCS6A01G343900.1	Wheat	plastid	87.53	79.26
Bra004800.1-P	Field mustard	cytosol	60.74	66.44
VIT_11s0016g02240.t01	Wine grape	mitochondrion	62.78	63.83
KRH60420	Soybean	cytosol	51.53	61.76
CDX79786	Canola	mitochondrion	62.17	61.66
GSMUA_Achr10P...	Banana	mitochondrion	46.42	61.19
CDY17890	Canola	mitochondrion	61.55	60.44
PGSC0003DMT400023814	Potato	mitochondrion	60.53	60.16
Solyc11g017050.1.1	Tomato	extracellular	60.94	59.84
KRH41721	Soybean	mitochondrion	60.74	59.52
AT2G44020.1	Thale cress	mitochondrion	61.15	58.97
Zm00001d010340_P001	Maize	plastid	43.97	43.52
Zm00001d049743_P001	Maize	cytosol, mitochondrion, nucleus	16.16	23.65
Zm00001d011574_P001	Maize	cytosol, extracellular, plastid	6.95	22.22
Zm00001d029242_P001	Maize	plastid	12.88	20.79
Zm00001d017130_P001	Maize	plastid	20.25	20.37
Zm00001d047442_P001	Maize	plastid	12.27	20.13
Zm00001d050886_P001	Maize	mitochondrion	10.43	18.28
Zm00001d027230_P001	Maize	plastid	19.02	15.17
Zm00001d021376_P001	Maize	cytosol	19.43	14.8
Zm00001d018756_P001	Maize	plastid	17.59	14.05
Zm00001d006700_P003	Maize	mitochondrion, plastid	15.34	13.02

Protein Annotations

Gene3D:1.25.70.10	EntrezGene:100279410	MapMan:15.6.2.2	MapMan:16.12.2.2.1.5	ProteinID:AQK56132.1	ProteinID:AQK56133.1
ProteinID:AQK56134.1	UniProt:B7ZY02	EMBL:BT054194	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003690	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR038538	EMBL:KJ727644	InterPro:MTERF	InterPro:MTERF_sf
PFAM:PF02536	PANTHER:PTHR13068	PANTHER:PTHR13068:SF8	SMART:SM00733	UniParc:UPI0001917163	EnsemblPlantsGene:Zm00001d052081
EnsemblPlants:Zm00001d052081_P003	EnsemblPlants:Zm00001d052081_T003	SEG:seg	:	:	:

Description

mTERF protein domain21Mitochondrial transcription termination factor family protein

Coordinates

chr4:+:178936234..178939151

Molecular Weight (calculated)

54677.2 Da

IEP (calculated)

8.072

GRAVY (calculated)

0.069

Length

489 amino acids

Sequence
(BLAST)

001: MLALARALRS LGQAGARREG PLLAWLSSLR SAAFSSSSAP PEYDMPSVTW GVIQGRKERL VSRVLALDFL RSAGVSDPAG ELEAVELPSS LEVLQERLDF
101: LLRLGLSTDD LSNYPLLLAC SLRKNVIPVL SYLEKLGVTR ARLAAFVRAY PACLHASVAV DLAPMVKALR GLDVDRQDLP RVLERYPDVL GLKPDGTIST
201: SVAYLVGIVG VAPRDIGPMV THFPFFLGMR VGTTIKPFCD YITSLGLPMR ILARILEKRP YILGYDLEET VKPNVEALLS FGIQKEALPL VIAQYPSILG
301: LPLKAKLAAQ QYFFTLKLQI DPDGFARVIE KLPQLVSLNQ NVILKPVEFL RGRGISNEDV ARMVVRCPQI LLLRIELMKN SLYFFKSEMK RPMSELLEYP
401: EYFTYSLESR IKPRYMRVTS RGIKCSLDWF LNCSDMRFED RMQGDFIEGD APGPSFTMGG KLQMPGSQLV SDDDEDTDDE VLYRRTVMI

Best Arabidopsis Sequence Match ( AT2G44020.1 )
(BLAST)

001: MSYLLRRNKF VALLKRQSLI FPITSTEAKT LINPDPNIPQ FQNPCSIFRI AHYATQSSKF PEYEMPTVTW GVIQGKKEKL VNRVKICDYL KGLGIITDEL
101: ESIELPSTIE VMCERVEFLQ KLGLTIDDIN EYPLMLGCSV RKNLIPVLAY LEKIGISRSK LGEFVKNYPQ VLHASVVVEL APVVKFLRGL DVEKQDLGYV
201: LMKYPELLGF KLEGTMSTSV AYLVSIGVSP RDIGPMVTQY PYLLGMRVGT MIKPLVDYLI SIGLPKKIVA RMLEKRSYIV GYNLEETVKP NVDCLISFGV
301: KKELLPLLIA QYPQILGLPV KAKMSTQQYF FSLKLKIDPE GFARVVEKMP QIVSLKQNVI MKPIEFLLGR AFQVEDIAKM VVRCPQILCS RVELMKNSYY
401: FYKTEMGRPM KELVEYPEYF TYSLESRIKP RYQKLQSKGI RSSLNWFLNC SDQRFEERLQ GNFIDPDTEG PTFDMGGKLE MPGGEIVTDE EEDESDDEVL
501: YRRTLTL

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:O80572]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.