Factsheet for TraesCS6A01G201500.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, extracellular

Predictor Summary:

mitochondrion 3
extracellular 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, mitochondrion, plastid
Any Predictor:	extracellular, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	extracellular
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G219200.1	Wheat	plastid	96.79	96.1
TraesCS6D01G188800.1	Wheat	plastid	96.07	96.07
HORVU6Hr1G051070.1	Barley	cytosol, extracellular, plastid	93.21	93.21
Os02t0577501-00	Rice	plastid	78.57	78.01
OQU85198	Sorghum	mitochondrion, plastid	73.57	73.84
Zm00001d050886_P001	Maize	mitochondrion	73.57	73.84
TraesCS5A01G423600.1	Wheat	plastid	21.07	18.44
TraesCS1A01G084300.1	Wheat	mitochondrion	18.21	16.24
TraesCS2A01G255200.1	Wheat	cytosol	21.43	12.96
TraesCS1A01G252300.1	Wheat	cytosol	18.21	12.88
TraesCS7A01G250000.3	Wheat	cytosol	14.64	12.31
TraesCS6A01G214200.1	Wheat	plastid	20.36	11.78
TraesCS2A01G189200.1	Wheat	plastid	18.93	10.62
TraesCS6A01G343900.1	Wheat	plastid	18.57	9.63
TraesCS2A01G284000.1	Wheat	cytosol	4.29	8.89
TraesCS5A01G363600.1	Wheat	plastid	15.36	7.52

Protein Annotations

EnsemblPlants:TraesCS6A01G201500.1	EnsemblPlantsGene:TraesCS6A01G201500	Gene3D:1.25.70.10	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003690	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR038538	InterPro:MTERF	InterPro:MTERF_sf	PANTHER:PTHR13068
PANTHER:PTHR13068:SF36	PFAM:PF02536	SEG:seg	SMART:SM00733	MapMan:15.6.2.2	:

Description

No Description!

Coordinates

chr6A:-:332188647..332189489

Molecular Weight (calculated)

30845.3 Da

IEP (calculated)

11.088

GRAVY (calculated)

0.122

Length

280 amino acids

Sequence
(BLAST)

001: MLAHTRLPPP PPHPAQILPA RLAGGGGMEF RRKLHFLSAE LHLDPFPLLA LHPELRSAPL ALLHASLRLL LSHGLSAGDA SRVFSAFPSL LTSPPEESLR
101: FLSAAAPLPP PLLRAAVVRS PRLLAASIPD TLRPALYFLR HRVSLRRRPL PLAAALLLAF SVDRTLLPKL LFLGKATGLP DRAICTIIRR APAILSYGIE
201: TNLTPKLKFL ADGMSMDPAA ELTEFPHYFA FSLEGRIMPR HEALRLRGVD MSLKEMLKSS DDEFKERILD ATLSGNMQRM

Best Arabidopsis Sequence Match ( AT2G03050.1 )
(BLAST)

001: MIARCSLFPP PCFSAVRIRC FAGETSDTGI LFREKLIYLQ DLNVDPHKAL RVNPSLRSAP ISSVVSVETL LSSTGLSRPA VGRILDMFPD LLTSDPESEI
101: LPVLRFLSNE ISISEQDIPK SISRCPRLLI SSVDYQLRPA LTFLKTLGFV GRDTITSRNT VLLVSNVERT LIPKIEYLEE GLGFTREEVA KMVVRSPALL
201: TYSVDNNLVP KVEFFIEEMR GDVKELKRFP QYFSFSLERK IKPRHRLLKE HGILMPLSEM LKVSDGQFNH WLLELRLRSA ERR

Arabidopsis Description

MTERF1SOLDAT10 [Source:UniProtKB/TrEMBL;Acc:A0A178VYV9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.