Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- extracellular 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G201500.1 | Wheat | extracellular, mitochondrion, plastid | 96.1 | 96.79 |
| TraesCS6D01G188800.1 | Wheat | plastid | 96.1 | 96.79 |
| HORVU6Hr1G051070.1 | Barley | cytosol, extracellular, plastid | 93.26 | 93.93 |
| Os02t0577501-00 | Rice | plastid | 78.37 | 78.37 |
| OQU85198 | Sorghum | mitochondrion, plastid | 73.4 | 74.19 |
| Zm00001d050886_P001 | Maize | mitochondrion | 73.4 | 74.19 |
| TraesCS5B01G425900.1 | Wheat | plastid | 21.63 | 18.6 |
| TraesCS4B01G156500.1 | Wheat | mitochondrion | 18.44 | 16.56 |
| TraesCS7B01G141200.1 | Wheat | cytosol | 14.89 | 12.61 |
| TraesCS6B01G244200.1 | Wheat | plastid | 20.92 | 12.19 |
| TraesCS1B01G265700.1 | Wheat | cytosol | 18.44 | 12.01 |
| TraesCS2B01G267000.1 | Wheat | mitochondrion | 25.53 | 11.88 |
| TraesCS2B01G218100.1 | Wheat | plastid | 19.15 | 10.82 |
| TraesCS6B01G376100.1 | Wheat | mitochondrion | 18.79 | 10.79 |
| TraesCS5B01G365700.1 | Wheat | plastid | 21.28 | 10.26 |
Protein Annotations
| Gene3D:1.25.70.10 | MapMan:15.6.2.2 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003690 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR038538 | InterPro:MTERF | InterPro:MTERF_sf | PFAM:PF02536 | PANTHER:PTHR13068 |
| PANTHER:PTHR13068:SF36 | SMART:SM00733 | EnsemblPlantsGene:TraesCS6B01G219200 | EnsemblPlants:TraesCS6B01G219200.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr6B:-:307185992..307186840
Molecular Weight (calculated)
30959.4 Da
IEP (calculated)
11.093
GRAVY (calculated)
0.127
Length
282 amino acids
Sequence
(BLAST)
(BLAST)
001: MLAHTRLPPP PPPPHPAQIL PARLAGGGGV EFRRKLHFLS AELHLDPFPL LALHPELRSA PLALLHASLR LLLSHGLSAG DASRVFSAFP SLLTSPPEES
101: LRFLSAAAPL PPPLLRVAVV RSPRLLAASI PDTLRPALYF LRHRVSLRRR PLPLAAALLL AFSVDRTLLP KLLFLGKATG LPDPAICTII RRAPAILSYG
201: IETNLTPKLK FLADGMGMEP AAELTEFPHY FAFSLEGRIK PRHQALRLRG VDMSLKEMLT SSDDEFKERI LDATLSSNMQ RM
101: LRFLSAAAPL PPPLLRVAVV RSPRLLAASI PDTLRPALYF LRHRVSLRRR PLPLAAALLL AFSVDRTLLP KLLFLGKATG LPDPAICTII RRAPAILSYG
201: IETNLTPKLK FLADGMGMEP AAELTEFPHY FAFSLEGRIK PRHQALRLRG VDMSLKEMLT SSDDEFKERI LDATLSSNMQ RM
001: MMIARCSLFP PPCFSAVRIR CFAGETSDTG ILFREKLIYL QDLNVDPHKA LRVNPSLRSA PISSVVSVET LLSSTGLSRP AVGRILDMFP DLLTSDPESE
101: ILPVLRFLSN EISISEQDIP KSISRCPRLL ISSVDYQLRP ALTFLKTLGF VGRDTITSRN TVLLVSNVER TLIPKIEYLE EGLGFTREEV AKMVVRSPAL
201: LTYSVDNNLV PKVEFFIEEM RGDVKELKRF PQYFSFSLER KIKPRHRLLK EHGILMPLSE MLKVSDGQFN HWLLELRLRS AERR
101: ILPVLRFLSN EISISEQDIP KSISRCPRLL ISSVDYQLRP ALTFLKTLGF VGRDTITSRN TVLLVSNVER TLIPKIEYLE EGLGFTREEV AKMVVRSPAL
201: LTYSVDNNLV PKVEFFIEEM RGDVKELKRF PQYFSFSLER KIKPRHRLLK EHGILMPLSE MLKVSDGQFN HWLLELRLRS AERR
Arabidopsis Description
MTERF1SOLDAT10 [Source:UniProtKB/TrEMBL;Acc:A0A178VYV9]
SUBAcon: [cytosol,plastid,golgi,mitochondrion]
SUBAcon: [cytosol,plastid,golgi,mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.