Factsheet for HORVU1Hr1G061210.8

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G252000.1	Wheat	plastid	98.19	97.6
TraesCS1A01G252300.1	Wheat	cytosol	77.46	97.22
TraesCS1B01G265700.1	Wheat	cytosol	84.31	96.77
OQU77962	Sorghum	plastid	84.51	84.34
Os05t0404000-01	Rice	plastid	85.11	83.27
Zm00001d010340_P001	Maize	plastid	82.29	82.79
PGSC0003DMT400007420	Potato	mitochondrion	57.95	60.38
VIT_07s0104g00720.t01	Wine grape	mitochondrion	60.16	56.95
KRH72610	Soybean	plastid	57.75	55.41
GSMUA_Achr3P24870_001	Banana	cytosol, mitochondrion, plastid	43.06	54.87
Solyc04g005630.2.1	Tomato	nucleus	59.36	54.63
CDY21931	Canola	golgi, mitochondrion, plastid	55.33	51.98
Bra036228.1-P	Field mustard	golgi, mitochondrion, plastid	55.33	51.79
CDY22091	Canola	golgi, mitochondrion, plastid	55.33	51.79
AT4G02990.1	Thale cress	plastid	55.94	51.39
HORVU6Hr1G082970.1	Barley	cytosol	44.06	41.56
HORVU7Hr1G051550.3	Barley	mitochondrion	16.3	20.93
HORVU4Hr1G045210.1	Barley	plastid	13.68	20.06
HORVU6Hr1G051070.1	Barley	cytosol, extracellular, plastid	11.07	19.64
HORVU5Hr1G089290.3	Barley	cytosol	18.31	16.98
HORVU2Hr1G036490.17	Barley	mitochondrion	17.1	16.9
HORVU6Hr1G054650.2	Barley	plastid	15.09	15.43
HORVU0Hr1G013680.1	Barley	mitochondrion	4.63	9.91

Protein Annotations

Gene3D:1.25.70.10	MapMan:15.6.2.2	MapMan:16.12.2.1.1.6	EMBL:AK357240	UniProt:F2D033	GO:GO:0000003
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003690	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006355	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0008380	GO:GO:0009058	GO:GO:0009536	GO:GO:0009790
GO:GO:0009791	GO:GO:0009793	GO:GO:0009987	GO:GO:0032502	GO:GO:0042793	GO:GO:0042794
EnsemblPlantsGene:HORVU1Hr1G061210	EnsemblPlants:HORVU1Hr1G061210.8	InterPro:IPR038538	InterPro:MTERF	InterPro:MTERF_sf	PFAM:PF02536
PANTHER:PTHR13068	PANTHER:PTHR13068:SF24	SMART:SM00733	UniParc:UPI00020055D4	SEG:seg	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2D033]

Coordinates

chrchr1H:-:443921504..443923449

Molecular Weight (calculated)

55787.8 Da

IEP (calculated)

5.220

GRAVY (calculated)

-0.139

Length

497 amino acids

Sequence
(BLAST)

001: MMKSLFLFSA HPAPPLLPSP SLRRLLCLRA SSSSASTSSR PRPGRRSPGP ARPRQPQPSS LYARPSLLTM ERDRAARRAD VDAFLVSLGV DPGELAGLEL
101: PVTVDVMRER VEFLRSLGLG PDDLAAYPLA LGCSVRKNMV PVLDYLGKIG VRRDELPHLL RRYPQVLHAS IVVDLAPVVK YLQGMDVKPG DVPRVLERYP
201: ELLGFKLEGT MSTSVAYLVG IGVARRQIGG VITRFPEVLG MRVGKIIKPF VEHLQGIGLQ RLAVARMIEK KPYVLGFGLE ERVKPNIEAL LEFGVRKEAL
301: PSIVIQYPDV LGVELRDKLV EQQSLFESSI LVSGDDFGRV VERMPQAISL GRAAVLKHVN FLTGCGFLLS QVSKMVVGCP QLLALNMDIM KMNFEYFKNE
401: MERDLEELVE FPAFFTYGLE STIRYRHEIV AKKGFTCSLA WLLNCSDAKF DERMKYDTIG VEEMEDDNSF DRDRFEEQVQ DEDDDDMEED SDYDDTD

Best Arabidopsis Sequence Match ( AT4G02990.1 )
(BLAST)

001: MKIRFCNGFT KPGFLLVHFE PPSFFAVRSR SLSDSTYGNL CNHKKRPGTG IGLTVQCAIA NRRFSSRSLD SPRRERSSRS SSSSGRDRDR DKDKGRDSKS
101: LYSRPSLLDM NKEKAANRAK VYEFLRGIGI VPDELDGLEL PVTADVMKER VEFLHKLGLT IEDINNYPLV LGCSVKKNMV PVLDYLGKLG VRKSTFTEFL
201: RRYPQVLHSS VVIDLAPVVK YLQGLDIKPS DVPRVLERYP EVLGFKLEGT MSTSVAYLVG IGVARREIGG ILTRYPEILG MRVARIIKPL VEYLEVLGIP
301: RLAAARLIEK RPHILGFELD DTVKPNVQIL QDFNVRETSL PSIIAQYPEI IGIDLKPKLD TQRKLLCSAI HLNPEDLGSL IERMPQFVSL SESPMLKHID
401: FLTKCGFSID QTREMVIGCP QVLALNLGIM KLSFEYFQKE MKRPLQDLVD FPAFFTYGLE STVKPRHKKI IKKGIKCSLA WMLNCSDEKF EQRMSYDTID
501: IEEVETDPSS FDMNTLMQPE REEESDSEYE EEEDDDDEEF A

Arabidopsis Description

MTERF4Transcription termination factor MTERF4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZT96]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.